KEGG   Vibrio cholerae O1 2010EL-1786: Vch1786_I1346
Entry
Vch1786_I1346     CDS       T01650                                 
Symbol
ompT
Name
(GenBank) OmpT protein
  KO
K10940  outer membrane protein OmpT
Organism
vce  Vibrio cholerae O1 2010EL-1786
Pathway
vce05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vce00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    Vch1786_I1346 (ompT)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vce02000]
    Vch1786_I1346 (ompT)
Transporters [BR:vce02000]
 Other transporters
  Pores ion channels [TC:1]
   Vch1786_I1346 (ompT)
SSDB
Motif
Pfam: Porin_4 DUF2490
Other DBs
NCBI-ProteinID: AET26947
Position
1:complement(1464129..1465235)
AA seq 368 aa
MENHLQKTGNRTRNSHIKKRQWINMKKTLLALAVLAAAGSVNAAEILKSDAGTVDFYGQL
RTELKFLEDKDPTIGSGSSRAGVDANYTVNDSLALQGKVEFALKDSGDMYVRNHILGVKT
NFGKFSFGKQWTTSDDVYGADYSYFFGGTGLRYGTLSDALHDSQVKYVYEADSFWVKAGY
GFPEDNAKQELAELYVGATFGDLAVHAGGGQNRDKAFKVGSNTVGTTTTDIKADVTNSYF
EVTGEYTIGDALIGVTYYNAELDVENNPLVIDEDAISVAGTYKVADKTKLYAGYEYVMQE
ANTGADEDGTLVYLGVEYKFASWARVYAEYGYGDGTTLGYTNKGSDAEVKATKVDSANNF
GIGARIYW
NT seq 1107 nt   +upstreamnt  +downstreamnt
ttggaaaaccaccttcaaaaaacagggaaccggacaaggaattcccatattaagaaaagg
cagtggattaacatgaaaaaaactctattagcactcgcagtgcttgcagccgcaggctct
gtaaacgcagctgaaattctaaaatcagatgctggcacagttgatttttacggtcagcta
cgtacagaattgaaattcttagaagataaagatccaacaattggttctggttcttcgcgc
gctggtgttgatgcaaactacaccgttaacgatagcttagcgttacaaggtaaagtggaa
ttcgcactaaaagacagtggcgatatgtatgttcgtaaccacattcttggtgtaaaaact
aattttggtaagtttagctttggtaaacaatggactacatctgacgatgtatacggtgct
gactactcttatttctttggtggtacaggtcttcgttacggcacactgtctgatgcacta
cacgattctcaagtcaagtatgtttacgaagctgacagcttctgggttaaagctggttac
ggttttccagaagataatgcaaagcaagagctagcagaactgtatgtaggtgcaacattt
ggtgatttggctgtgcacgctggtggtggtcaaaaccgtgataaagcattcaaagttggt
agtaatacggttggcacaacaaccacagatattaaagctgacgtaacaaatagttacttt
gaagtgacaggtgagtacactattggtgatgcactgattggtgttacttactacaacgca
gaactagatgtagaaaataacccactagtgatcgatgaagacgctatttctgttgctggt
acatacaaagttgctgacaagacaaaattgtatgctggctatgagtatgtaatgcaagaa
gcgaacactggcgcagatgaagatggtactcttgtttacctaggtgttgaatacaaattt
gcaagctgggctcgtgtatatgctgagtatggctacggcgatggtacaactctgggttac
accaacaagggttctgacgcagaagttaaagcaacgaaagtcgacagcgctaataacttt
ggtatcggtgctcgtatctactggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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