KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_08035
Entry
IR04_08035        CDS       T03827                                 
Name
(GenBank) sugar ABC transporter ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IR04_08035
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vcf02000]
    IR04_08035
Transporters [BR:vcf02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    IR04_08035
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 TniB SMC_N AAA_22 AAA_25 AAA PRK AAA_16 AAA_18 Rad17 AAA_33 AAA_29
Other DBs
NCBI-ProteinID: AJZ99095
Position
I:complement(638087..639070)
AA seq 327 aa
MTTPLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHK
PPAFITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITR
HTNMTREQAKRRAEGLLEIVDIHPSRLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEP
TTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQ
ILETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEACTKV
PTVLRQIEHGRFSNCHLYTQSNATIKR
NT seq 984 nt   +upstreamnt  +downstreamnt
atgactacgccattaatctcaatccgcaacttatgcgtggactacattaccgatgctggt
gacgtccgtgcctgtaacaatgtgagctttgatttagcccccggcgaggtgtttggcctt
gcgggtgaatccggctgtggtaaatccaccgttgccttctcgctgatgcgcctgcataag
ccgcccgcgttcatcactggtggcgaggtgatcttcaacggtgaagacatcctgaaatac
agtgatgagcgcatgcaagcgttccgttggaaagaaatgtcgatggtatttcaaagtgcg
atgaacgcgctgaacccagttctgaccatggaagagcaattttgcgatgtgatcacgcgc
cataccaatatgacgcgtgaacaagccaaacgtcgtgctgaagggctgttagaaattgtg
gatattcacccaagccgtcttaacgattatccgcaccagttctcgggtggtatgcgtcaa
cgcttggtgattgcaattgcgctcgcgctcaatccaaaaatgatcattatggatgaacct
acgaccgcgctagatgttgtcgttcagcgtgaaattctgcagaagatctacgcactcaaa
gaagagtttggtttctctattctgttcattactcatgacttgtcactgatggtcgagttc
tcagaccgtatcggcatcatgtactccggtgaattgattgaagtggctccttcaaaacaa
attctggaaaccccttaccacccttataccaaagggttgggaagttcttttccaccatta
actggaccaaaaacaaaactcacagggatccctggaaacccactcaacctgttggacatt
cctcaaggttgccgtttccaagctcgctgtgaccgagttcatgaagcttgtactaaggta
ccgaccgtactgcgccaaatcgagcatggccgcttttctaactgccatctctatacgcaa
tcgaacgccactataaaacgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (21)   

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