KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_17105
Entry
IR04_17105        CDS       T03827                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00470  D-Amino acid metabolism
vcf00550  Peptidoglycan biosynthesis
vcf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    IR04_17105 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    IR04_17105 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vcf01011]
    IR04_17105 (murD)
Enzymes [BR:vcf01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     IR04_17105 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:vcf01011]
 Precursor biosynthesis
  Amino acid ligase
   IR04_17105 (murD)
SSDB
Motif
Pfam: MurD-like_N Mur_ligase_M Mur_ligase_C DAO NAD_binding_8 TrkA_N SAM_HAT_N NAD_binding_9 Pyr_redox_2 NAD_binding_7 Pyr_redox Thi4
Other DBs
NCBI-ProteinID: AKA00808
Position
I:complement(2656837..2658159)
AA seq 440 aa
MDRWQGIQHVVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVALHRSG
WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDTPVIAITGSNGKS
TVTDLSGVLANAAGVKAAVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKAAAF
LNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAHLQVVTFGVEQAAQ
FSLAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSY
TGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIEGQLYLLVGGVGKGADFTPLA
PVLATLPVQLCCFGVDGHQFMPLHPSARFYDSMESIIRSIRPQLKSGDMVLLSPACASFD
QFKNFMARGDIFAQLARQYA
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggaccgttggcaaggcatacaacatgtggtcgtcgtagggctcgggattaccgggctc
tctgtcgttaattatctgagaaaatatcatccgtcggtaaccgtgcaggttatcgatacg
cgcgaagcaccaccggggcaagagcagctttcgtcggacgttgcactgcatcgtagcggt
tggaatcttgagtggttactcaatgccgatttggtagtcaccaacccaggcattgcgttg
gcgacgccggaaatccaacaagtgctggccgctggaattcctgttgtcggtgatattgag
ctctttgcatggcatgtggatacacccgttattgcgatcactggctcaaatggcaaaagc
accgtcactgatttaagcggtgtgttagccaatgctgctggtgtgaaggccgcggtaggt
ggcaatattggggttccggcactggatctgatttctccagacgttgaactgtatgtgctt
gagctatcaagcttccaattagaaactacctctagcttaaaactgaaagcggccgcgttt
ctcaatctttctgaagatcatatggatcgttatcaggggatggaagattaccgccaagcc
aaactgcgcattttcgatcatgccgaaaccgcagtggtgaatgccgatgatactcaaact
tttcctgaccacgcggcacatctgcaagtggtgacgtttggtgtcgagcaagctgcacaa
tttagccttgctcaacatcaaggccgcgaatacctttttgcgcgcgatgaggccgtcatg
gcgtgtgctgagctgagtttagttggccgtcataacgtggcaaacgtacttaccgtgtta
gctttgctggattcagccggagtaaacttccgtttggctttggatgcactcaagtcttac
acaggtttgacacaccgctgccaagtggttgccgataatcacggcatcaagtgggtcaat
gattctaaagcgaccaatgttgcgagtacgctggcagcattgtcgggattaaaaatcgaa
ggtcagctctatttgttggttggtggcgtaggtaaaggggcggatttcacgccgctcgcc
cccgtattggcgacattgcctgtgcaattgtgctgctttggtgtggacggccatcaattt
atgccactgcacccttcggctcggttttatgactcgatggagagcataattcgctcaatc
cgcccgcaattaaaaagtggggatatggtgctgctctctcccgcttgtgcgagctttgat
cagttcaaaaactttatggcgcgtggggatatttttgcccaactcgctcggcaatatgca
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (30)   

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