KEGG   Vibrio cholerae O1 El Tor N16961: VCA0017
Entry
VCA0017           CDS       T00034                                 

Definition
(RefSeq) hcp protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VCA0017
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VCA0017
Secretion system [BR:vch02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VCA0017
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-GeneID: 2612496
NCBI-ProteinID: NP_232418
UniProt: H9L4Q3
Structure
PDB: 
5MXN

Position
II:19781..20299
AA seq 172 aa
MPTPCYISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPS
GQRVHKPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASI
VDIHCEMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPIEA
NT seq 519 nt   +upstreamnt  +downstreamnt
atgccaactccatgttatatctctatcgaaggccaaactcagggtcttatcactgcaggc
gcatgtactgctgactctatcggcgattcattcgttgaaggccatgaagatgagatgctg
gttcagcagtttgaccacgtcgtaaccgtaccgactgacccacaatctggtcagccttcc
ggccaacgtgtgcacaagccattcaaattcactgtggcgctgaacaaagcggttcctctg
ctgtacaacgcgctctcttcaggtgagaagctgaaaaccgttgagctgaaatggtaccgt
acttctatcgaaggcaaacaagaaaacttcttcaccactaagctggaaaacgcgtctatc
gttgatatccactgtgaaatgccacactgccaagacccagcaaaatctgactttactcag
aatgtgactgtgtctctgtcttaccgcaaaatcacttgggaccacgttaacgcgggcacc
tcaggctctgatgactggcgtaagccaatcgaagcgtaa

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