KEGG   Vibrio cholerae O1 IEC224: O3Y_09295
Entry
O3Y_09295         CDS       T01766                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
vci  Vibrio cholerae O1 IEC224
Brite
KEGG Orthology (KO) [BR:vci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vci03032]
    O3Y_09295
   03036 Chromosome and associated proteins [BR:vci03036]
    O3Y_09295
   03400 DNA repair and recombination proteins [BR:vci03400]
    O3Y_09295
DNA replication proteins [BR:vci03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    O3Y_09295
Chromosome and associated proteins [BR:vci03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    O3Y_09295
DNA repair and recombination proteins [BR:vci03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      O3Y_09295
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 ACP_syn_III_C Arteri_nsp7a GTP_EFTU_D2 VWA_2 HU-CCDC81_euk_1 Nup214_FG
Other DBs
NCBI-ProteinID: AFC58733
Position
I:complement(2115221..2115493)
AA seq 90 aa
MNKTQLVEQIAANADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIKIAEAKVPSFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataagacacaactagtagaacaaattgcagcgaacgcagatatctctaaagcctct
gcaggtcgcgctcttgacgcattcatcgaagcagtcagcggcacactacaatcaggtgac
caagtggcactggttggttttggtacgttcagcgtacgtactcgcgcagcgcgtactggt
cgtaacccaaaaactggcgaagagatcaaaatcgctgaagcgaaagtgccttcattcaaa
gcaggtaaagctctgaaagacgcttgcaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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