KEGG   Vibrio cholerae O1 MJ-1236: VCD_001330
Entry
VCD_001330        CDS       T00903                                 
Name
(GenBank) NA-binding protein Fis
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vcj  Vibrio cholerae O1 MJ-1236
Pathway
vcj05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VCD_001330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vcj03000]
    VCD_001330
   03036 Chromosome and associated proteins [BR:vcj03036]
    VCD_001330
   03400 DNA repair and recombination proteins [BR:vcj03400]
    VCD_001330
Transcription factors [BR:vcj03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    VCD_001330
Chromosome and associated proteins [BR:vcj03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    VCD_001330
DNA repair and recombination proteins [BR:vcj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      VCD_001330
SSDB
Motif
Pfam: HTH_8 HTH_30 Xre-like-HTH DUF134 HTH_28
Other DBs
NCBI-ProteinID: ACQ59503
Position
1:340055..340351
AA seq 98 aa
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVTELYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq 297 nt   +upstreamnt  +downstreamnt
atgttcgaacaaaatctgacttcagaagctttaaccgttactaccgtaacttcacaagac
caaatcacgcaaaagccactgcgtgactctgttaaagcgtctcttaaaaactacttggct
caactgaatggccaagaagtgactgaactgtatgaattagttctagctgaagttgaacaa
ccacttctggacaccatcatgcaatacactcgcggtaaccaaactcgcgcagcaactatg
atgggtatcaaccgcggcactcttcgtaagaaactgaaaaaatacggcatgaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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