KEGG   Vibrio cholerae O1 MJ-1236: VCD_001416
Entry
VCD_001416        CDS       T00903                                 
Name
(GenBank) hypothetical protein
  KO
K18893  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
vcj  Vibrio cholerae O1 MJ-1236
Pathway
vcj02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    VCD_001416
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vcj02000]
    VCD_001416
Transporters [BR:vcj02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    VCD_001416
SSDB
Motif
Pfam: ABC_tran ABC_membrane SMC_N RsgA_GTPase AAA_22 MMR_HSR1 AAA_16 AAA_29 DUF87 Septin Zeta_toxin Interferon AAA_21
Other DBs
NCBI-ProteinID: ACQ59585
Position
1:432625..434460
AA seq 611 aa
MFMFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVR
YMGEIVDILSTQERHQFWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIR
WSTHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIA
EADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFS
HSQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTV
GVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKF
GELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQI
RIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHD
FIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVE
SAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLW
AHQTGGFIGEA
NT seq 1836 nt   +upstreamnt  +downstreamnt
ttgttcatgttccaatggtttgaaaaactgaccgaacctttcccggctcaagagccgcaa
acaccgcctaaatctttggttgctttctgtcgttactacacgcaaggctttgaaaaaccg
ctgttattgatgtcgctactcagcgcctgcgtagcgatggcagaagtcactctcgtacgt
tacatgggagagattgttgatattctcagcactcaagagcgccaccagttttgggaaatg
cacggcgaacggctgtggacgatggcggcactggtactggtagtgatgccgattctggca
ctcgtacactcgatgttgctgcatcaaaccattttgggtaactacccgatgtcgatccgc
tggtcgactcatcgctatttactcaaacaaagtatcggcttcttccaacgtgattttgct
gggcgcgttgcgacaaaagtgatgcaaaatgcgaatagcgtgcgcgaaacggtgctgaaa
ttggtcgatctgtcggtctatatcgcggtgtatatggtgtcgatgctggtgatgattgcc
gaggctgacaaaattttggtggtgccgatcctcgtttggctgctcttctatatcgcgatt
caggtctacttcgtaccccgcttaaaaaccatttcgaccgatcaagccaacgcacaatcg
caaatgaccgggcggattgttgatacctacaccaacatcaccaccgtaaagctgttctcc
cactctcagcgcgaaaccacctacgcaaaatcgggtatgaagcagtttctacacacggtt
taccgccagatgcgtaccttaacctcgcttctctacagtgtggatctgatcaactatctg
ttgctgtttagcattgcagccctctcgatccagttatggctcgcggaaacggtcaccgtc
ggggtgatcgcaattggcattacgatcgcgctgcgcatgcaaggcatgtcgaagtggatc
atgtgggaaattcgcgctctgtttgaaagcgttggcaccgtgattgacagcatgaacacc
atagcgaacccagtggaaattgaggatcgcccacaagcaaaatcgctccaagtgaaattt
ggtgagctgagcttctcgcaagtccgttttggttacagcgcgcaaaaaaccgtgtttgac
gatctcaacttggtaattcaagccggagaaaaagtcggcattgtcggccgctctggcgcg
ggcaaatccacgttagtcaatctactgctgcgcttttatgatgtgcaaagcggtcagatt
cgaattgatgggcaagacattagccatgtcagccaagagtcgttgcgccgccatatcggc
atgatcacccaagatacttcactgctgcaccgctcgatccgcgataacattttgtacggc
aaccccgatgccgatcaagccgccatcgaagaagccgctcgccaagcgcatgctcatgat
ttcattcaggagttgcaagatgaacaaggccgcactgggtatgatgttcaagtcggtgaa
cgtggcgtaaaactgtctggcggccaacgtcaacgtattgcgatcgcacgcgtgctattg
aaaaacgcgccaatcctgatcatggacgaagccacttccgcactcgattctgaagtggaa
tcagccattcaagagaatctgcatactttgatggcaggcaaaaccgtgattgcgattgcg
caccgtttatcgacaattgccgcgatggatcggctgattgtgatggatgaagggaaaatc
gtagagcaaggcacgcatcaagagctactggcgcacaaagggatttatgcccagttatgg
gcgcaccagaccggcggttttattggcgaagcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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