KEGG   Vibrio cholerae O1 LMA3984-4: VCLMA_A2354
Entry
VCLMA_A2354       CDS       T01871                                 
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
vcl  Vibrio cholerae O1 LMA3984-4
Pathway
vcl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VCLMA_A2354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcl03019]
    VCLMA_A2354
   03110 Chaperones and folding catalysts [BR:vcl03110]
    VCLMA_A2354
   03029 Mitochondrial biogenesis [BR:vcl03029]
    VCLMA_A2354
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcl04147]
    VCLMA_A2354
Enzymes [BR:vcl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     VCLMA_A2354
Messenger RNA biogenesis [BR:vcl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VCLMA_A2354
Chaperones and folding catalysts [BR:vcl03110]
 Heat shock proteins
  HSP60 / Chaperonin
   VCLMA_A2354
Mitochondrial biogenesis [BR:vcl03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    VCLMA_A2354
Exosome [BR:vcl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VCLMA_A2354
  Exosomal proteins of other body fluids (saliva and urine)
   VCLMA_A2354
  Exosomal proteins of breast cancer cells
   VCLMA_A2354
  Exosomal proteins of colorectal cancer cells
   VCLMA_A2354
  Exosomal proteins of bladder cancer cells
   VCLMA_A2354
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AEA79544
Position
I:complement(2663248..2664882)
AA seq 544 aa
MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV
AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV
ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA
ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDMGMGGM
GGMM
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggctgctaaagacgtacgttttggtaatgacgctcgtgtaaaaatgctagaaggcgta
aacattctggccgatgcggtaaaagtgaccttaggtcctaaaggccgtaacgtagttctc
gacaaatctttcggtgcaccaaccattactaaagatggtgtatcagttgcgcgtgaaatt
gaactggaagacaaattccagaacatgggcgcacaaatggtcaaagaagtcgcttctcaa
gccaacgacgcggcgggtgacggtaccaccacagccaccgtactggctcaagcgattgtg
aacgaaggcctaaaagcggtcgcggcgggcatgaacccaatggatctgaagcgcggtatc
gataaagcggttatcgctgcggtagaagagttgaaagcactgtctgtaccttgtgccgat
actaaagcgattgcccaagtaggtaccatctctgctaactcagactctagcgtgggcaac
atcattgctgaagcgatggaaaaagtgggtcgcgatggcgtgatcaccgttgaagaaggc
caagcgctgcaagatgagctggatgtggttgaaggtatgcagtttgaccgtggctacctg
tcaccgtacttcatcaacaaccaagaatcaggcagtgtagaactggataatccattcatc
ctgctggtggataagaaaatctctaacatccgcgaactgctgccagtactggaaggcgta
gcgaaagcctctcgtccactgctgatcgtggctgaagatgtggaaggcgaagcgctggcg
actctggttgtcaacaacatgcgcggcatcgtgaaagtggcagcggttaaagctcctggc
tttggcgatcgtcgtaaagcgatgctacaagatatcgcgatcttgactggcggtgttgtg
atctctgaagagatcggtctggagctggaaaaagcgactctggaagacctaggccaagcg
aaacgcgtttctatcaccaaagaaaactcaaccatcattgatggagctggcgatcaagcc
gcgatccaaggtcgtgttgcgcagatccgtcaacaaatcgaagaagccacttctgactac
gacaaagagaaactgcaagagcgcgtagcaaaactggctggcggcgttgcagtaatcaaa
gtgggcgcagcaaccgaagtggaaatgaaagagaagaaagatcgcgtagaagacgcgctg
cacgcgactcgcgcggcggtagaagaaggcgttgttgcgggtggtggtgtagccctgatc
cgtgcagcatctaaactctcttctttggtgggtgacaacgaagagcaaaacgtgggtatc
cgtgtcgcactacgtgcgatggaagcgccactgcgtcaaatcgtgaaaaacgcgggtgac
gaagaatcagtggttgccaacaatgtgcgtgcaggcgaaggtaactacggttacaacgcg
gcaacgggcgtgtacggtgacatgatcgaaatgggtattctggatccaaccaaagtaacc
cgttctgctctgcaattcgcagcgtctgttgcgggtctgatgatcaccactgaggcgatg
atcactgaactgccgaagaaagatgcaccagcaatgccagacatgggcatgggtggcatg
ggcggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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