KEGG   Vibrio cholerae O1 M66-2: VCM66_2424
Entry
VCM66_2424        CDS       T00891                                 
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
vcm  Vibrio cholerae O1 M66-2
Pathway
vcm03030  DNA replication
vcm03430  Mismatch repair
vcm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VCM66_2424 (holC)
   03430 Mismatch repair
    VCM66_2424 (holC)
   03440 Homologous recombination
    VCM66_2424 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcm03032]
    VCM66_2424 (holC)
   03400 DNA repair and recombination proteins [BR:vcm03400]
    VCM66_2424 (holC)
Enzymes [BR:vcm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VCM66_2424 (holC)
DNA replication proteins [BR:vcm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VCM66_2424 (holC)
DNA repair and recombination proteins [BR:vcm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VCM66_2424 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi Glyco_transf_4
Other DBs
NCBI-ProteinID: ACP06721
UniProt: C3LR43
Position
I:2625193..2625642
AA seq 149 aa
MPTATFYLISRDSAQATPEGLAQYVLYLTRHFAAQGARIYLQCQDKPHAEQLAERFWQIE
PEQFLAHNLVGEGPKSGTAIEIGYVGVSPSWNRQLAINLADNQTTFARTFTEVVDFVPCA
ENAKQLARERYKLYRQAGYQLQTVEIQYP
NT seq 450 nt   +upstreamnt  +downstreamnt
atgcctaccgcaactttttacctgatttcccgagattctgctcaagcaacgccagaaggc
ttggcgcagtacgtgctgtatttgacgcgtcactttgccgcgcaaggcgcacgcatttat
ctgcaatgccaagataaaccacatgccgagcagctagctgagcgattttggcaaatcgaa
cccgaacagtttttagcgcacaatctggtcggtgaaggtcccaaatccggtaccgcgatt
gagataggttatgtgggcgtttccccctcttggaatcgtcaactggcaataaatttggcg
gataatcagacaacctttgcgcgtacctttaccgaggtggtagacttcgtgccctgcgca
gaaaatgccaagcagctggcgcgcgagcggtataaactctatcgacaagcaggttatcag
ctgcaaactgttgagattcagtatccataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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