KEGG T00891: VCM66

Vibrio cholerae O1 M66-2: VCM66_A0889

Entry

VCM66_A0889       CDS       T00891

Name

(GenBank) putative TrmA family RNA methyltransferase

K03212

23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]

Organism

vcm Vibrio cholerae O1 M66-2

Brite

KEGG Orthology (KO) [BR:vcm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcm03009]
    VCM66_A0889
Enzymes [BR:vcm01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     VCM66_A0889
Ribosome biogenesis [BR:vcm03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VCM66_A0889

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_15 Methyltransf_25 Cons_hypoth95 Methyltransf_32 Methyltransf_12 Methyltransf_4 Met_10 Methyltransf_11 TehB

Other DBs

NCBI-ProteinID:

ACP07848

UniProt:

C3LWJ3

Position

II:complement(856058..857185)

AA seq 375 aa
MQCEFFIQKRCTSCHQCAQPYSQQVENKDQQLRELIAPAMDVQWLPPVTSADTAFRNKAK
MVVLGAAHAPILGIEDAQGQPLSLVTCPLYPQPMQELLAYLENWIRIAGIPPYNKLKKKG
ELKFILLTRSENSGQFMLRFVARSHAVLERIERNLPTLIAAFPTIEVVSVNIQPVHMARL
EGEEEIFLTETQSLLEQFNDVPMVIRPKSFFQTNPQVAEQLYATARAWVREIAPTQMWDL
FCGVGGFALHCAAPNTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSA
PELVLVNPPRRGLGSELTAQLEALAPQHILYSSCNPQTMVKDIAELASYQMSRVQWFDMF
PHTDHAEVLTLLVRK

NT seq 1128 nt +upstreamnt +downstreamnt
atgcagtgtgagttctttattcaaaaacggtgtacctcttgccaccagtgtgcgcagccg
tattcccaacaagttgagaataaagatcagcagttgcgtgagttgattgcgcctgccatg
gatgtgcagtggttaccccctgtcaccagtgctgacaccgcgtttcgcaataaagccaaa
atggtggtgctcggtgcggctcacgcgccgattttaggcattgaagatgcgcaaggtcag
cctttgtcgctggtgacttgcccgctttatccgcagccgatgcaagagttgctcgcttat
ctggaaaactggatccgtatcgcgggtattccgccctataacaagctgaagaaaaaaggt
gaactgaagtttattctgctcacccgcagtgaaaacagcggccaatttatgctgcgtttt
gtggcacgcagccatgcggtgcttgagcgaattgaacgcaatttgccgacattgattgcg
gctttcccgacgatcgaagtcgtttccgtcaatatccagccggtgcatatggcgcgttta
gaaggtgaagaggaaattttcctcaccgaaacgcaaagcctgcttgaacagttcaacgat
gtgcctatggtgatccgcccgaaaagctttttccaaactaatccccaagtggctgagcag
ctatacgcgaccgcgcgtgcttgggtgcgcgagattgcgccaacacaaatgtgggatctg
ttttgtggcgttggtggctttgcgctgcattgcgccgcgccaaacactgctgtgacgggc
attgaaattgaaccagaagcgattgccagtgcgcaacgttcggcgcaaatgatggggatt
gataatctcagctttgcagcgctcgattcggccaagttttcacaaagccagatgagtgca
ccggagttagtgttggtcaatcctccacgtcgtggtttgggcagcgaactgactgcgcag
ttggaagcgctcgcgccacaacacattctttattccagctgtaacccgcagaccatggtc
aaagacatcgctgagctcgccagctaccaaatgagtcgcgtgcagtggtttgatatgttc
ccgcatacagatcacgccgaagtgctgaccttgttggtcagaaaatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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