KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_103142
Entry
VOLCADRAFT_103142 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K13176  THO complex subunit 7
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VOLCADRAFT_103142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_103142
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_103142
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     VOLCADRAFT_103142
Spliceosome [BR:vcn03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    VOLCADRAFT_103142
SSDB
Motif
Pfam: THOC7 DEAD_assoc Vfa1 Exonuc_VII_L HIP1_clath_bdg
Other DBs
NCBI-GeneID: 9624635
NCBI-ProteinID: XP_002946720
JGI: 103142
UniProt: D8TKU8
Position
Unknown
AA seq 205 aa
MAAVKLTPAEEEAIIKQRYLTQMTVPKGNLPLKVLTKKFLQLLEQLDKGPDAEADVARLY
REFLREVAQTELHAKKLRSVCEANTREQNTYNQKQRELEEAIEQTKRDIEEKKLELQRAK
QVLGQNQQYEIMEHPSREVTQAAMDAEMALMAEAKTEGARIAQLMERRRKQFSLLFYVIE
ELQRTTAEEGIAEELAGLDGMDVDG
NT seq 618 nt   +upstreamnt  +downstreamnt
atggctgctgtcaagctaacgccagctgaggaggaggccatcatcaagcagcgctacctg
acgcagatgacggtgcctaagggcaacctcccgctcaaggtcctcacaaaaaagttcctg
cagcttctagaacagttggataaaggccccgatgcggaggctgatgtggctcgactgtac
cgggagttccttagagaggtggcacagacggagctacacgctaagaagctccggtctgtt
tgtgaggcgaacacgcgggagcagaacacgtacaaccagaagcagcgcgagctggaggag
gccatcgagcagacaaaacgggacatagaggagaagaagctggagctgcagagagctaag
caagtgctgggacagaaccagcagtatgagatcatggagcacccctccagggaggttacc
caggcggccatggatgcggagatggcgctgatggcggaggccaagacggagggcgcgcgg
atagcgcagctcatggagcggcgccggaagcagttctccctgctgttctacgtcatcgag
gaacttcagcgtacgacagcggaggagggcattgcggaggagctggcggggctagatggc
atggacgtggacgggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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