KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_105243
Entry
VOLCADRAFT_105243 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03030  DNA replication
vcn03082  ATP-dependent chromatin remodeling
vcn03410  Base excision repair
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VOLCADRAFT_105243
   03410 Base excision repair
    VOLCADRAFT_105243
   03420 Nucleotide excision repair
    VOLCADRAFT_105243
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    VOLCADRAFT_105243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcn03032]
    VOLCADRAFT_105243
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_105243
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_105243
Enzymes [BR:vcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VOLCADRAFT_105243
DNA replication proteins [BR:vcn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    VOLCADRAFT_105243
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    VOLCADRAFT_105243
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      VOLCADRAFT_105243
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone Bromo_TP Sec1 CENP-T_C DUF6261 TAFII28 Importin_rep_6
Other DBs
NCBI-GeneID: 9615821
NCBI-ProteinID: XP_002951737
JGI: 105243
UniProt: D8TZI6
Position
Unknown
AA seq 249 aa
MDTSATEKPETDVDVPRALIKRIVKAKLSALAEDESKDFGISKDALTALSESTKVFISLI
ASTANDICQEKRRSTVNADDVFNALQDLDFSELVAPLKEQLEAFKEAVKERNKNRPSKKR
KNTVDAQVAVPRNLKQQQYMAQHQNQHAAVAAAPADADADAVGGVGEVLDGGHGSVVDAG
GEPDELQHDAAALDADVTADVLGGPADDDGLGGLGMGMGLGLVDSDPTCLGDPSDVGVEV
EDMLVDAPP
NT seq 750 nt   +upstreamnt  +downstreamnt
atggacacttccgcaacggaaaagccagaaacggatgtcgacgtgccaagggctctcatc
aagcgcatcgttaaggcgaagctatccgccctggctgaggacgagagcaaggattttggg
ataagcaaggatgcccttacagccttgtcggaaagcaccaaggtgttcatcagcctgatt
gcgtcgactgcgaacgacatttgtcaggagaagcgccgctccacagtcaacgcagatgat
gtttttaacgctcttcaagacctggacttttcagaacttgtggcgccgttaaaagagcag
ctggaagcgttcaaggaggctgtcaaggaacgaaacaaaaacaggccctccaagaagcgc
aaaaacaccgtagacgcgcaggtggctgttccccgaaaccttaagcagcaacagtacatg
gctcagcaccaaaaccagcacgcagctgtggcggcagcccccgccgatgctgacgctgac
gcagtcggcggtgttggtgaagtcctagacggggggcatggcagtgtcgtggatgccggt
ggggaaccagatgagcttcaacacgatgcagccgctttggacgccgacgtgacggcggac
gttttggggggacccgcagacgatgacggacttggcgggcttggtatgggcatgggcctc
ggcctggttgatagtgatccgacttgcctgggtgacccctcggacgtgggcgtggaggtg
gaggacatgctagtggatgcgccgccttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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