KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_107778
Entry
VOLCADRAFT_107778 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K18758  DIS3-like exonuclease 2 [EC:3.1.13.-]
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_107778
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     VOLCADRAFT_107778
SSDB
Motif
Pfam: RNB OB_Dis3 Rrp44_CSD1 Fan1_SAP
Other DBs
NCBI-GeneID: 9627133
NCBI-ProteinID: XP_002957710
JGI: 107778
UniProt: D8UGB4
Position
Unknown
AA seq 1177 aa
MTSSTVDQQVRKMAPLYPETNYHASTRRQTDRTTFSSTRTHPMFESLSRWMNFGNDPAYQ
AALDAATRSSVLAAPSQTPTFAPSLSPPPPPPTTQPHETSPSLELGPRSRGSGGGAPASQ
PLPHVTSGAGSGHAAGSSIGMQARGDRRSQQQPQQPQQQERRQPRDTASGVVSQRSGSGS
EAVAAAEAQLSRTRLEAGRTRSGSRTDEAGGVNQTGAGGARKESGWFGSYHVGLWGMGEH
LSPGDLSAGLKSGRLFRGRIRINPGNTAEAYVTVPGLPHDLLVRGELSRNRAVEGDEVAV
QVQPPTAWFVKNKGSQQQQQQQQQQKQQAAAGTQATGRGSSEEAPWQSCTSPDQVKQVMC
DLLAARSELRATAKVVAVLDPSPKRSQLVGLLRLVGRLPDTSLPSWDPSRDGAAMPGPLN
AAVEAARAAALQLHLVPLDPRLPTCRVEADKVYNLSPALLVGLLRGEQTASRTLVSALLL
SWPPASQQPLAGLRSSLGQAGEIESETAAILEGQGIRATDFEPQVLACLPPLPWRIGERD
LAGRRDFRSQRVFSIDPPTAKDLDDALSIEPLTGGGPEAAEGAAWRVGVHIADVSHFIEP
FSALDVEAGLRSTSTYLVQRVVPMLPPLLCEQLCPLNPGEDRLTCSVVWDMDKHGNILST
WFGRSVIRSCAKLTYPLVQKMIEGEFHAEDTGVPLHGEGVSWEQEANQLVEEFMVLANIS
VAKFISQVFPDRAMLRRHPPPNDTKMQELREAAEAAGVELNVSSAAALQTTLNALRASAP
PPPPPAGEGEGEGEGGREGGAGLLSAAARHRRKVELLVMLATRPMQLAKYFSTGSLDEAQ
WLWRHYALAIDHYTHFTSPIRRYPDVVVHRQLAAALDVTQGGLSVEEAARKHRLLDPALT
DRVAEHCNERRLAARDAQDASLRLYLCVLLARQPRIVLGTVNGLGGNLFFSAYLSEFGTE
VTVVLGKTGVPLTAEWNQGAKVLTLTRGSQPQLDGGELPQGAGALGRKQRSQGGSGAGSG
GGRGGGRRGQQSRQGSGSGGGGGGNGGGGNGSNSDSSLSLVEWVESLPPVCNPYGLQPVS
VPLHLRQFDDVPLLVTAELVAGEAPRLVARMYLREAESAVEESSRRRGAEEEEAAAAGAA
ATAAEAVAEGPVVEETEGGIGTAVRQSMVPWDNMLMD
NT seq 3534 nt   +upstreamnt  +downstreamnt
atgacgagttcgacagtcgatcagcaagtacggaagatggctccactctatccagaaacc
aactatcacgcaagcaccaggcgacagactgaccggacaacattttcctcaacacgtaca
catccgatgtttgaaagcttgtcgaggtggatgaactttggcaacgaccccgcgtaccag
gccgccctggatgcagccacccggagctccgtcctcgcggccccctcccaaacaccaacc
ttcgcaccttcactatctcccccgccaccaccacccaccacccaaccgcacgaaacaagc
ccctccctggagctaggccctcgcagccgaggatctggcggtggtgcgcccgcgtcccag
ccgcttccccacgttacatccggggctggcagcggccatgcagccggcagctctatcggc
atgcaggcgcgcggtgaccgccggagccagcagcagccgcagcagccacagcagcaagag
cggcggcagccccgggacacagccagcggtgtggtctcccagagatcagggtcgggatct
gaggctgtggcggctgcggaggctcagctgtccaggacgcgcttggaggctgggaggacg
cggtcgggatcgaggacggacgaggccgggggggtgaatcagacgggcgccggtggggcg
aggaaggaaagcggatggtttggatcctaccatgtgggtttgtggggtatgggggagcac
ctgtccccgggggacctatccgccggtctcaagagcgggcggctgttccgggggaggata
cggatcaacccggggaacacagcggaggcctacgtgacggttcccggcctcccccacgac
ctgctggtccgcggtgaactgagtcgcaatcgggcagtggagggggacgaggtggcggtg
caggtgcagccgcccactgcctggttcgtgaagaataagggaagccaacagcaacaacaa
cagcaacagcaacagaagcagcaggccgctgcgggcacacaggccacgggtcgcggttcc
agcgaggaggcgccatggcagtcctgcacctcccccgaccaggtcaagcaggtcatgtgc
gacttactggcagcgaggtcagaacttagggcgacagccaaggtggtggccgtcttggac
ccctcccccaaacgcagccagctggtggggctgctgcgcctggtgggccggctgccagac
acatccctgccctcctgggacccctccagggatggtgcagccatgccggggcccctcaac
gcggccgtggaggcggcgcgggcggccgctctgcagctgcaccttgtgccgctggacccc
cgcctgccgacgtgtcgtgtggaggcggacaaggtgtataacttgtcaccggcgttgctg
gtggggctgctgaggggggagcagacggcgagcaggactctggtctccgccctgctgctc
agctggccgcccgccagccagcagcccctggccggtctgcgctccagtctgggccaggcg
ggggagatagagagcgagactgccgccatactggaggggcagggcatccgagcgacggac
ttcgagccccaggtgttggcgtgtctgccccccctcccctggaggattggtgaacgggat
ctcgccgggaggagagacttccgctcccagcgtgtgttctccatcgacccccccactgct
aaggatctcgatgacgctctgtccattgagccgctgaccggcggggggcctgaggcggcg
gagggagccgcctggcgcgtgggggtccacatcgcggacgtctcccatttcattgagccg
ttcagcgctctggacgtggaggcgggcctgcggtccaccagcacgtacctggtccagcgg
gtagtgcccatgttgccgcccttgctgtgtgagcagctgtgccccctcaatccgggggag
gacagactgacatgcagtgtggtgtgggacatggacaagcacggcaacattctgtcaacg
tggtttggtcgcagcgtcattcgctcctgcgccaagctgacttacccgctggtccagaaa
atgatcgagggggagttccacgcggaggatacgggtgtgccacttcacggggagggagtg
agctgggagcaggaagccaaccagctcgtggaggagttcatggtgttggcgaacatcagc
gtagccaagttcatatcccaggtgtttccggatagggccatgctgaggcgccaccctccc
ccaaacgacaccaagatgcaggagcttcgggaggcggccgaggcggccggagtggagctg
aatgtgtcgtcagccgcagccctgcagaccaccttgaatgcgctgcgggccagtgccccc
ccgcccccaccgccggcaggagagggggagggggagggggagggggggagagagggcggt
gcggggttgttgtctgccgccgctcgccaccgtcgcaaggtggagctgctggtgatgttg
gccacccggcccatgcagcttgccaagtacttcagcacggggagcttggacgaggcgcaa
tggctgtggaggcactatgccctggctatcgaccactacacgcacttcacctcccccatt
cgccgctacccggacgtggtagtgcaccggcagctggcggcggcgctggacgtgacccag
gggggcttgagtgtggaggaggcggccaggaagcaccgcctgctggacccggctctgaca
gaccgtgtggcggagcactgcaacgagcgccgtctggccgcccgtgacgcccaggacgcc
tccctgcggctctacctgtgtgtgctgctggcccgccagccgcgtattgtcctgggcacc
gtcaacggcctgggcggaaacctcttcttctccgcctacctctccgagttcgggaccgag
gtcacggtggtgctgggcaagacgggtgtgccgcttacggcggaatggaaccagggtgcc
aaggtgctgacgctgacccgcgggtcacaaccgcagctggacggcggcgagctgccgcag
ggcgccggcgctctcggccggaagcaacgcagccaaggtggtagtggtgctggtagtggt
ggtgggcgaggtggtgggcgacggggtcagcagagccggcagggctctggttcaggtggt
ggtggtggtggtaacggtggtggtggtaacggtagcaatagtgatagcagtcttagtttg
gttgagtgggtggaatcgctgcctccggtttgtaacccgtacggtttgcagccggtatca
gttccgctgcacctgcgccagttcgacgacgtgccgctgctggtgacggcggagttggtc
gcgggggaggcccccagactggtggcacggatgtacctgcgtgaggcggagagcgccgtg
gaggagagcagcaggaggaggggagcggaggaggaagaggcagctgcagccggagcagct
gctacagccgcggaggcggtggcggaggggccagtggtggaggagactgaggggggtatt
ggtacggcggtacggcagtccatggtgccctgggacaatatgctgatggattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system