KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_56931
Entry
VOLCADRAFT_56931  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VOLCADRAFT_56931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_56931
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    VOLCADRAFT_56931
SSDB
Motif
Pfam: GTP_EFTU EFG_C GTP_EFTU_D2 EFG_III EFG_IV MMR_HSR1
Other DBs
NCBI-GeneID: 9620392
NCBI-ProteinID: XP_002947572
JGI: 56931
UniProt: D8TMC4
Position
Unknown
AA seq 1003 aa
RVRNLCILAHVDHGKTTLSDHLIGSNGLIHPRMQGELRYLDSREDEQARGITMKASAISL
LYLSSGYLINLIDSPGHVDFCSEVSTAARLSDGALVVVDAVEGVCIQTHAVLRQAYEEKV
KPVLVINKLDRLILELRLTPEEAYGRLRSIVTHANMILSAFASERYLREADAVLAEEEEE
EEEGDAFDPVAGSVAFGSAADGWAFRLDQFAEMYAEKLGCKTEALVRGLWGDWAFSPKDK
RVVRTSRKGGGAGGGKLKPMFVQFALEPIWKAYSVCDPGEDVGGVLGAIVRSRGLGGLVP
TKALEHPDPRQALRSVLRAWLPLSEAVLGMAAAQLPSPAAAAPVRAPRLLGGPPGSPPPP
GLPLHAAQELARLEACVARSDASASAPLVVYVSKMVAVPRGLLPRAPGEGAAGALTHGSH
SQDPQEEVFLGFGRVFSGTARPGQRVHVLNGAYNPAAPTCQRQTAVLGAVYMMMGRALER
VQQVPAGNVLAMAGLDTAVLKSATLSSTPACRPLASLMFQAAAIVMVAVEPAHPSDLPAL
LRGLQLLNRADPFVEISVLDSGEHVLGAAGEVHLGTCLKDLRERFAKVDLRVSPPLVAFR
ESVFCPSELPEGAPLGGLVGGLRAPRVVEATTPNGVCVVRVRAAALPGGVAGALDGRPEL
LRRVLVDGEGWQADASSSCSSSAPSASATLVSELEALRGELRAAAKAAGPQHEARILQML
ERAWLLGPKRIGPNLLLVPSRRANGEDGHLYDSVDGAAGPVAGEATTSCRANGGECGVSE
PLGHVVASVESGVVAGFQIATSSGPLCEEPLWGVAFELEVRLQQPQQAGGSQADVYGPFS
GQVMTAVALACRTAVLEADARLVEAQYLCQLTASAEALSGMYAVLGRRRARILREEMREG
SDTFLVSCYLPAEASFGLADEMRRRSSGAASASLLLSHWERLQVDPFFAPTTEEEREEHG
EDASGLTNLARRLIDAVRRRKGLPVEEKVVARATKQRTLKRNV
NT seq 3012 nt   +upstreamnt  +downstreamnt
cgcgtccgcaacttgtgcatcttggctcacgtggaccatggcaagaccaccttgtcagac
cacctcatcggttcgaacggcctcatccatccccggatgcagggtgagctgcgctacctg
gacagccgcgaggatgagcaggcccggggcatcaccatgaaggcatcagccatcagcctg
ctgtatctgtcctccggctacctgatcaatctgatcgactcccccgggcatgtggacttc
tgctccgaggtgtccactgcggcacgactcagcgacggggcgctggtggtggtggacgcg
gtggaaggcgtgtgcatccagacgcatgccgtactacggcaggcgtacgaagagaaggtg
aagcccgtgctggtgatcaataaactggacaggctcattttggagcttagactcaccccc
gaagaggcgtacggcagactgcggagcattgtgacgcacgccaacatgatcctgtcggcc
tttgccagcgagcgctaccttcgggaggcggatgcggtgctggcagaggaggaggaggag
gaggaggagggcgacgcgttcgacccggtggctggcagtgttgcgtttggcagtgcagct
gacggctgggcttttcgactggaccagtttgccgagatgtacgctgagaagctggggtgc
aagacggaggcattggttcgggggctgtggggcgactgggcgttcagccccaaggacaag
cgcgtggtcaggacgtctcgcaaaggtggcggagctggcggaggtaaattgaagcccatg
tttgtgcagtttgctttggagcccatttggaaggcgtacagtgtttgcgatccaggggag
gatgtgggcggggtgctgggggccatcgtgaggtcccgggggctggggggcctggtaccc
accaaggcgcttgagcatcccgacccgcgacaggcattgaggtccgtgctccgcgcctgg
ctgccgctgtccgaggcggttctgggtatggcggccgcacaactccccagtccggcagcc
gcagctccggtccgtgccccccggctgctgggagggccccctggctccccaccgccaccg
ggactgcccctgcatgcggcacaggagctggcgcgactggaggcgtgtgtggcacgcagc
gacgcatcggcttctgctcccctagtggtgtacgtgtccaagatggtggcggtgccccgg
gggctgctgcccagggctccgggggagggcgcggccggtgcgctgacccatgggtcacac
tcccaagacccacaggaagaggtgttcctgggcttcgggcgcgtcttcagcggcacggcc
cgtcccggccagagggtgcacgtgctgaatggtgcctacaaccccgcggccccaacctgc
cagcgtcagactgccgtactgggggctgtgtatatgatgatggggagagctctggagagg
gtacagcaggtccccgccggtaacgtgctcgcaatggccgggctggacactgcggtgctc
aagtcggccaccctgtcctccacccccgcatgccggcccctggcctccctgatgtttcag
gcggcagcgattgtgatggtagctgtggagcctgcccaccccagtgatctgccggcgctg
ctccgcggcttgcagttgctgaaccgggctgaccctttcgtggagatcagtgttctggac
agtggcgagcacgtgttgggtgctgccggcgaagttcatctgggcacgtgcctcaaggac
ctcagggagcggttcgccaaagtggacctgagggtatccccgccgctggtggccttccgc
gagtcggtcttctgcccctccgagctgcccgagggcgcccccctgggagggctggtgggg
ggcctgcgagccccgcgggtggtggaggccaccacacccaacggcgtgtgtgtggtgcgg
gtgcgggcggcggcgctgcccggcggtgtggcgggggcgttggatgggcggcctgagctg
ctgaggagggtgctggtggatggagagggctggcaagccgacgcttcgtcttcttgctcc
tcctccgcgccgagtgcatctgcaaccttggtttcggagctggaggccttacggggtgag
ctgcgggcggccgcaaaggcggcggggccgcagcacgaagcgcggattttgcagatgcta
gagcgcgcgtggttgctggggcccaagcgcatagggcccaacttactcctggtgccgtca
aggagagccaacggggaagacgggcacttgtacgacagcgttgatggcgccgcagggccg
gtggcgggggaggcgacgacgtcatgcagagccaacggcggggaatgtggagtttcggag
ccacttggtcatgtagtggcgagtgtggagtcgggtgtagtggcgggcttccagatcgct
acttcgtcaggtcctctttgcgaggagcccctttggggcgttgccttcgaactcgaagta
cgtctgcagcagccgcagcaagccggcggtagccaggcagatgtgtacggaccgttctcg
ggacaggtaatgacggcagtagcattggcgtgtcggacggcagtcctggaggcggatgca
cgcctggtggaggcgcagtatctgtgccagcttactgcgagtgcggaggcgcttagcggc
atgtatgcagtgctaggtcgccgccgtgctcgcatcctgagggaagagatgcgggaaggc
agcgacaccttcctggtcagctgctaccttcccgcggaggcctccttcggcctggcggat
gagatgaggcgccggagctccggtgcggcttccgcctccctcctgctgagccactgggaa
cggctgcaggtggaccccttcttcgcccccactacggaggaggagcgcgaggaacacgga
gaggacgcctcgggcctgactaacttagccaggaggctcattgacgcagtacggcggcgg
aagggtctgccggtggaggagaaggtggtggctcgggccacaaagcaacgtaccctcaaa
cgaaacgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (66)   

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