KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_79148
Entry
VOLCADRAFT_79148  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VOLCADRAFT_79148
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_79148
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    VOLCADRAFT_79148
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 NBCH_WD40 WDR54 Nup160 PALB2_WD40
Other DBs
NCBI-GeneID: 9617419
NCBI-ProteinID: XP_002946595
JGI: 79148
UniProt: D8TJD1
Position
Unknown
AA seq 944 aa
MVKAYLRYEFSAAFGVITSSANPTYDASGKLLFTASLENISVWNAKQGSLVRQLSPVVTS
TSTGSGASGGGVAEVTVLCCAPGSATIAAGYSDGTVRLWDYLSGECSVTFRGHKTAVSCL
RYNGGGSLLVSGGRDTDLVVWDVVGETGLYRLKGHKDQVTDVSFLPGQSKLVSCSKDGLV
KVWDLDTQHCCQTLTGHKAEVWSLDVNPAGTRLATGSTDNEIRVFAAVEVTGGGGAPAAG
GAAPGREDRDHIVLVAMGSVRRGAAAHERVAMLRFSGDGEWLGVQAAGKGLELFRVRDED
EARKKLKRRKRRRKEKVAKKAAGRATTGTTRTTEVTAAVMMTRTTQRQDWAYLLAVSKGA
KIKAFCFAPPAVKLAAGVACRLVLSLSNNCIEILNVASETHSYDTASRIDLGGHRSDVRA
LSLSSDDSALLTASSAALKLWNPRTGSCLATMDSGYGLCVLFAPGNKFAVIGTKEGTLEV
FDLGAATRVHVEEGAHGGAVWALAPLPNKTGFFSGAADKTVKLWHWSVVSLEGGSKSLRL
AHVRTVPMADDVLAVRCSPDGKLLAVALLDATVKVYFADSMKFFLSLYGHKLPVLCMDIS
SDSSMLLTGSSDKNIKVWGLDFGDCHKSLFAHGDAVMSVAWVPGTHYAFSAGKDRLLKYW
DLDRFELLLELPGHHGEVWCCGVSQFGDFVITGSHDRSIRRWERTAEPFFVEEERERRLE
SLFEADMETTAADRDAAAGAAGNDATGTAAATPAGRRTLEAVSAADAIIDALEAAALEMD
RLRTADRERAEAAAAGRPPPQPLPPNALLAGLAPSAYVLKVVSGVRASELEQAVMMLPFA
DALRLLGYLPQWLQAGGPAVELTVRLAVLLVRLHQGQLVATAAARPVLLALQRRLRGAAQ
GLKDVVGFNLAAMSHLTRRAREREGVTEADVIVPAKRQLLGKGA
NT seq 2835 nt   +upstreamnt  +downstreamnt
atggtgaaagcataccttcgatatgaattctcagccgctttcggggtcattacgagctct
gcgaaccctacgtatgacgcgagcgggaagctgctcttcaccgcatcgctggagaacatt
tccgtttggaacgccaagcaaggcagcctggtacggcagctaagccccgttgtaaccagc
accagtaccggttccggagccagtggcggcggtgttgcggaggtgacagtgctctgctgc
gcccccggcagcgccaccatcgccgcggggtactcggacggcacggtgcggctctgggac
tacctctctggggaatgcagtgtcaccttccggggacacaagaccgccgtatcctgcctc
cgctacaacggcggcggctctctgctggtcagcggcggtcgggacaccgacctggtggtg
tgggacgtggtgggggagacggggctgtaccgcctgaaggggcacaaggaccaggtcacg
gatgtgtccttcttgcccgggcagtccaagttggtctcctgcagcaaggacggtctggtc
aaggtgtgggatctggacacacagcactgttgccagaccctgacggggcacaaggcggag
gtctggtcactggatgtcaaccccgcggggacgcggctcgccaccgggtccacggacaat
gaaattcgcgtcttcgccgcggtggaggtgacaggaggcggcggtgcgcctgccgcgggt
ggtgctgctccgggtcgggaggatcgcgaccacattgtgctggtggccatggggtctgtg
aggcggggagctgccgcccacgagcgggtggccatgctgcggttcagcggcgatggggag
tggctgggtgtgcaggcggctggcaaggggctggagctattcagagtccgggatgaggat
gaggcacggaagaagctgaagcgacgcaagcggcggcggaaggagaaggtcgcgaagaag
gccgcggggcgggcaacaacgggcacgacgaggacgacggaggtgacggcggcggtgatg
atgacgaggacaacacaaaggcaagactgggcttatctccttgccgtcagcaagggcgcc
aagatcaaggcgttttgcttcgcgccgccggctgtcaaactagccgccggggtggcgtgt
cggctggtgctgtcgctgtcgaacaactgcatcgagatcctcaacgtcgcctccgaaacc
cactcgtacgacaccgcctcccgcatcgaccttggcggtcaccgttccgacgtccgcgcg
ctgtccctgtcctcggacgactccgcgctgctgaccgcctcctccgccgccctcaagttg
tggaacccccgcacgggctcgtgcctggccaccatggacagcgggtacgggctgtgcgtg
ctcttcgcacccgggaacaaattcgcggtgatcgggaccaaggaaggcaccttggaggtg
ttcgacctgggtgccgccacccgggtgcatgtggaggagggggcgcacgggggggcggtg
tgggcgttggcgccgctgcccaacaagaccggcttcttcagcggggccgcggacaagacc
gtcaagctgtggcactggtcagttgtcagcctggagggcggctccaagtccctgagacta
gcgcacgtgcgcactgtgcccatggcggatgatgtgctggcagtgcgttgcagtccggac
ggcaagctgctcgccgtggcactgctggatgcgactgtcaaggtgtactttgcggacagc
atgaagttcttcttgtccctgtacggccacaagttgcccgtactgtgtatggacatatcc
tcggactcctcaatgctgctcactggttcctcagacaagaatatcaaggtgtggggtctg
gatttcggtgactgtcacaagtccttgtttgctcacggtgacgcggtcatgtcggtggcc
tgggtgcccggcacccactacgccttctccgcgggcaaggaccggctgctcaagtactgg
gacctggaccggttcgagctgctgctggagctgccggggcatcacggggaggtgtggtgc
tgcggagtcagccagtttggggattttgtgattacaggttcccacgaccggtccattcgg
cggtgggagcgtaccgcagagccgttcttcgtggaggaggagcgggagcgccgactggag
tcgctgttcgaggccgacatggagactaccgccgcagacagagacgccgccgccggtgcc
gccggcaacgacgccaccggcaccgcagcggcgacacccgcgggtcgtcgtacactggag
gccgtcagcgctgccgacgccatcatcgacgcactggaggcggcggcactggagatggac
aggttgcgtacggcagaccgcgaacgtgctgaggcggcggcggcggggcgtccgcctcca
caacctctgccccccaacgcgttgctggccggtctggctcccagcgcctacgtgctcaag
gtcgtttcgggggtgcgagccagtgagcttgagcaggcagtcatgatgctgccgtttgcg
gatgctttgcggctgctggggtacctgccacagtggctgcaggccggtgggccggcggtt
gagctgacggtacggctggcagtgctgttggtgcgtttacaccaggggcagttggtggcg
acggcggcggcgaggccagtactgctggcgctgcagcggcggctgcgtggcgcggctcag
gggttgaaagacgtggtgggattcaacttggctgcgatgtcgcacctgacgaggcgggcg
agggagcgggagggggtcacggaagcggacgtgatcgtgccggccaagaggcagctgctg
gggaagggcgcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (62)   

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