KEGG   Vibrio cholerae O1 O395: VC0395_0116
Entry
VC0395_0116       CDS       T00520                                 

Gene name
hcp-1
Definition
(GenBank) hcp protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
vco  Vibrio cholerae O1 O395
Pathway
vco03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vco00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC0395_0116 (hcp-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vco02044]
    VC0395_0116 (hcp-1)
Secretion system [BR:vco02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VC0395_0116 (hcp-1)
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: ABQ18566
UniProt: A0A0H3AFE3
Position
1:complement(132421..132939)
AA seq 172 aa
MPTPCYISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPS
GQRVHKPFKFTVALNKAVPLLYNALSSGEKLKSVELKWYRTSIEGKQENFFTTKLENASI
IDIHCEMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPIEA
NT seq 519 nt   +upstreamnt  +downstreamnt
atgccaactccatgttatatctctatcgaaggccaaactcagggtcttatcactgcaggc
gcatgtactgctgactctatcggcgattcattcgttgaaggccacgaagatgagatgctg
gttcagcagtttgaccacgtcgtaaccgtaccgactgacccacaatctggtcagccttca
ggccaacgtgtgcacaagccattcaaattcactgtggcgctgaacaaagcggttcctctg
ctgtacaacgcgctctcttcaggtgagaagctgaagtcggttgagctgaagtggtaccgt
acttctatcgaaggtaaacaagaaaacttctttaccactaagctggaaaacgcgtctatc
atcgatatccactgtgaaatgccacactgccaagacccagcaaaatctgactttactcag
aatgtgactgtgtctctgtcttaccgcaaaatcacttgggaccacgttaacgcgggcacc
tcaggctctgatgactggcgtaagccaatcgaagcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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