KEGG   Vibrio cholerae O1 O395: VC0395_0377
Entry
VC0395_0377       CDS       T00520                                 
Symbol
malS
Name
(GenBank) alpha-amylase
  KO
K01176  alpha-amylase [EC:3.2.1.1]
Organism
vco  Vibrio cholerae O1 O395
Pathway
vco00500  Starch and sucrose metabolism
vco01100  Metabolic pathways
vco01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:vco00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    VC0395_0377 (malS)
Enzymes [BR:vco01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.1  alpha-amylase
     VC0395_0377 (malS)
SSDB
Motif
Pfam: Alpha-amylase Glyco_hydro_66
Other DBs
NCBI-ProteinID: ABQ18335
UniProt: A0A0H3AD99
Position
1:complement(413777..415849)
AA seq 690 aa
MKLNALTLSLLSALALPALASPASTANLTVATTTNSRDFPLQADEPLVIPLTKGDYTLTI
SGIGGDCPPVPEQEIKFNTPIALNCHVPTQLPLSIRFTGDYAFQWQAQNNTLTFVRQTTK
AAKTEFHRPIPNVSCEVYQGGEVTLDLASSFADGTELQDAMTGQVVTIEQGKVRLTPSAN
SGGLVLLEPKQTAKAEPKQPFTYRNANIYFVMVDRFYNADPSNDGSYGRHKDGQEEIGTF
HGGDLKGVIAKLDHIQSLGTDAIWLSPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTKI
DANFGKDEDLQTLVREAHRRGIKILMDAVINHAGYATLADLQQDAVQVVNAPMLPERWND
WKPSADENWHSFHQAIDYQSKNWQQWWGPDWVRAGLPGYPAPGSSDITMNLAGLPDFRTE
SPQAVTPPQWLLNNPGTRVVSKPNYTVADYLIEWQSDWVRRFGIDGFRIDTVKHVEGEVW
QRLKQRATESLAAWRKDNNQSGEPFWMMGEVWGHGAYRSPYFDDGFDALINFDIQKRMDN
GAACLSQMAMVYRDYAQTLAKYPDFNPVSYMSSHDTELFFGRFKSLDMQRNAANALLLTP
GAIQVYYGDEVAREAGPYADDFHQGTRSDMPWEWNAERQALLKHWQTLGQFRQRHPAIGT
GEHREIAQSNAYVFTRTLGEDKVVVAFVGR
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgaaactgaatgccttgaccctatcgctgctctcagctctagctttgccagcgctggcc
tcgccagcttccactgcgaatttaacggtagcaaccaccaccaacagccgcgattttcca
ctgcaagccgatgaaccactggtgatcccgctcactaagggcgactacaccttgaccatt
agcgggattggcggtgattgcccaccggtccccgaacaagagatcaaattcaacacgccc
atcgctctcaattgccatgtcccgactcagttacctttgagtatccgttttaccggggat
tacgcatttcagtggcaagcgcaaaacaatactctcaccttcgtgcgtcaaaccactaag
gcagccaaaactgagtttcatcgcccgatcccaaacgtcagttgcgaagtgtatcaaggc
ggtgaagtgactttagatctggcgagcagctttgccgatggaaccgagttgcaagatgct
atgactgggcaagtagtgaccatcgagcaaggcaaagtgcgcttaaccccttccgctaac
agcggcggcttggtgttgttggaacctaaacagacagcaaaagccgagcccaaacagccc
tttacctatcgaaatgccaatatttattttgtgatggttgatcgcttctacaacgcagac
ccaagcaatgatggcagttatggtcgtcacaaagatggccaagaggagatcggaacattt
catggcggcgatctcaagggtgtgattgcaaaacttgaccatatccaaagcttaggcaca
gatgctatctggctctctccgattgtcgaacaggtacatgggtttgtcggcggtggcgag
aaaggatcattcccgttttatgcctatcacggctattggacccgcgatttcaccaagatc
gatgccaactttgggaaagatgaggatttacaaaccttagtgcgtgaggcgcatcgtcgc
ggcattaaaattttgatggatgcggtgatcaatcatgcaggttacgcgacactcgccgat
ttacagcaagatgcagtacaagtggtgaacgcacctatgctgcctgaacgttggaatgac
tggaaacccagcgccgacgaaaactggcacagcttccatcaagccattgattaccaaagc
aagaattggcaacagtggtgggggccagactgggtacgcgcaggcttaccgggctatcct
gcgccgggcagcagtgacatcacgatgaatctcgccggtttaccggattttcgcactgaa
tccccccaagccgttaccccgccgcagtggctactcaacaatcccggcacacgagtggtg
agcaaacccaattacactgtcgctgactatttaattgaatggcaaagcgattgggtacgc
cgctttgggatcgacggttttcgcatcgacaccgtcaaacatgtggaaggggaagtgtgg
caacgcttaaaacagcgcgcgacggaaagccttgcagcgtggcgtaaagacaataatcaa
agcggtgagccgttttggatgatgggcgaagtgtgggggcacggtgcctatcgcagcccc
tactttgatgatggctttgatgcattgattaactttgacattcaaaaacgtatggataac
ggcgcagcctgtttgagccagatggcgatggtgtatcgcgattacgcgcaaaccctcgcc
aaatatcccgactttaaccccgtcagttatatgtcctcgcacgatactgagttgtttttc
gggcgctttaaatcactggatatgcaacgtaacgccgccaatgccctgctactgacaccg
ggtgctatccaagtgtattacggcgatgaagtcgcccgcgaagcgggaccgtacgcagac
gatttccatcaaggcactcgctctgatatgccttgggaatggaatgccgaacgccaagca
ctgctcaagcattggcaaaccttaggtcaattccgtcaacgtcaccctgcgataggaacg
ggagagcatcgcgaaatcgcccaatctaacgcttatgttttcactcgcacattgggtgaa
gataaggtggtcgtggcgttcgttggccgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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