KEGG   Vibrio cholerae O1 O395: VC0395_A0238
Entry
VC0395_A0238      CDS       T00520                                 
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
vco  Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:vco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vco03009]
    VC0395_A0238 (rluD)
Enzymes [BR:vco01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     VC0395_A0238 (rluD)
Ribosome biogenesis [BR:vco03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VC0395_A0238 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 TruB_N
Other DBs
NCBI-ProteinID: ABQ19881
UniProt: A0A0H3AG77
Position
2:248627..249601
AA seq 324 aa
MAHQIELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVM
GGEVITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALL
FHYPPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMT
AGGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHM
AYLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAP
VPDDMVEMTLALREDAKLNRTEEY
NT seq 975 nt   +upstreamnt  +downstreamnt
atggctcatcagattgaattaactcaaacagtaaaagatagccagcttggtcaacgtctt
gatcaagctgtggctgaattatttaccgacttttcccgctcacgtttaaaagagtggttg
ttggaaggcaagattgccgtgaatggtgatgtcatcaccaaaccgcgtaccaaagtgatg
ggtggcgaggtgattaccgttcaggcagaactggaagacgaacagcgctgggaagcgcag
gatttgccactgaacattgtgtatgaagatgacgacattatcgttattaacaaaccgcgt
gactttgtggttcaccccggtgctggtcaggcggataaaaccgtgcttaacgcattgctg
ttccattatccgccgattgctgaagtgccacgtgcaggcatcgtccatcgtctcgataaa
gatacaacgggtttgatggtggtcgcgaaaacggttcccgcgcaaacacgcttggtacgt
gcactacaaaagcgcgacgtgactcgtgagtacgaagcgattgtgattggcacaatgacc
gcgggtggcatgattgataagccgattggccgtcactcgaccaaacgtactttaatgtcg
gtctctccgatgggcaaacatgccgtgacccattaccgtgtggcagagcatttccgtgaa
catacgcgtttgcgtctacgtttggaaacgggtcgtacccaccaaattcgtgtgcacatg
gcttatctgcaacacccactcttgggtgatacggcttatggtggtcgtgcacgcattccg
aaaggtgcgacggaagagctgacggaaatgattcgtgacttcgatcgccaagcactgcac
gcggtgatgttgaaatttgagcatccggttacgggggaagagctcgaattccatgcacca
gtgcctgatgatatggttgagatgacgcttgcactgcgtgaagatgcgaagctaaaccgc
actgaagagtattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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