KEGG   Vibrio coralliilyticus OCN014: JV59_38905
Entry
JV59_38905        CDS       T03497                                 
Name
(GenBank) general secretion pathway protein GspD
  KO
K02453  general secretion pathway protein D
Organism
vct  Vibrio coralliilyticus OCN014
Pathway
vct03070  Bacterial secretion system
vct05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vct00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JV59_38905
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    JV59_38905
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vct02044]
    JV59_38905
Secretion system [BR:vct02044]
 Type II secretion system
  General secretion pathway protein
   JV59_38905
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 DDOST_48kD
Other DBs
NCBI-ProteinID: AIU68183
Position
1:complement(3188366..3190396)
AA seq 676 aa
MNHWLKKSAWLLAGSLLTSPAAVFANEYSASFKGTDIQEFINIVGRNLEKTIIVDPSVRG
KIDVRSYDMLSEEQYYSFFLNVLEVYGYAVVEMDNGVIKVIKSKDAKTSAIPVVGDGSIQ
GDEVVTRVVAVRNVSVRELSPLLRQLNDNAGAGNVVHYDPANIILITGRAAVVNRLADII
KRVDQAGDKEIEVVELDNASAAEMVRIVEALNKTTDAKSTPAFLQPKLVADDRTNSILIS
GDPQVRQRLRKLIKQLDIEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKSSGSKQ
SSSAKRGEVMISAHPGTNALVLTAPPDIMNALQDVISQLDIRRAQVLIEALIVEMTEGDG
INLGVQWGSLETGAVIQYGNAGTKIGNVMVGLEEAEDQKSTEYYTNSAGERVPYDVTEPG
DYSTLASALSGVNGAALSVVMGDWTALISAVSSDTNSNILSSPSITVMDNGEASFIVGEE
VPVITGSAAGSNNDNPFQTVDRKEVGIKLKVVPQINEGNSVQLTIEQEVSNVLPATSNAA
VDVSFAKRQLNTSVMVEDGQMIVLGGLIDERAQESESKVPLLGDIPYLGRLFKSTSSQLQ
KSNLMVFIKPTIIRDGVTADGITQRKYNFIRAEQLYKADQGLRLMEDVQTPVLPKFGEDI
SHPAEIQAFLDQMETK
NT seq 2031 nt   +upstreamnt  +downstreamnt
gtgaaccattggcttaaaaaaagcgcttggcttttagcaggaagcttgttgacgtcacct
gccgctgtattcgctaacgaatacagtgcgagctttaaaggcacagatattcaagagttc
atcaacattgttggtcggaatctggaaaaaaccatcattgttgacccgtctgtacgtggc
aagattgacgtacgcagctacgacatgctgtcggaagaacaatattacagcttcttttta
aacgttctggaagtctatggctacgctgtggtggaaatggacaacggtgtcatcaaggtc
atcaaatctaaagatgcgaaaacctccgcgattcccgtggttggtgatggctcaattcaa
ggagacgaagtcgtaacacgtgttgttgcggttcgtaatgtctcggtgcgtgagctttca
cctctgcttcgtcagctaaacgacaatgcgggtgcaggtaacgttgtgcactatgaccca
gctaatatcattcttattacaggtcgtgctgcggtagtaaaccgattggcagacatcatc
aaacgtgtcgaccaagcgggtgacaaagaaatcgaagtagttgagttggataatgcttct
gctgctgagatggttcgtattgttgaagctctgaacaagacgactgatgcgaaaagcaca
cctgctttcttacagccaaagctggttgcagatgatcgcacgaactctattctcatttcc
ggtgatcctcaggtacgtcagcgcctgcgtaagctgattaagcagcttgatattgagatg
gctaccaaaggcaataaccgcgtggtgtatctaaagtacgccaaagcggaagacttggtt
gatgtgcttaaaggtgtctctgacaatcttcaggcagaaaaatcatcaggctctaaacag
tcgtccagcgccaaacgtggtgaggttatgatctcagctcacccaggtaccaatgcgttg
gttctgactgcgccgccagatattatgaatgcgcttcaggatgtgatttctcaactggat
attcgccgtgcacaggtgctgattgaagccctgattgtcgaaatgacagaaggtgacggt
attaacttgggtgtccagtggggctcgctcgaaactggtgcagtgatccagtatggtaat
gccggaaccaagatcggtaacgtaatggtgggccttgaagaggctgaagatcaaaagagt
acagagtattacaccaatagtgcaggtgaacgagtaccttatgatgttacggaaccagga
gactactccacattggcttcagcgctctctggcgttaatggtgcggcacttagtgtagta
atgggagactggacggcactgatcagcgccgtatcgagcgataccaattctaacattctg
tcttctccaagcattactgtcatggataacggtgaagcgtctttcattgtcggtgaagaa
gtgccagtgatcacagggtctgcggcaggctcaaacaacgacaacccattccagaccgtt
gatcgtaaagaagttggtatcaagctgaaagtcgttccgcaaatcaacgaaggtaactcg
gtacagcttaccattgagcaagaggtgtctaacgttctgcctgcgaccagtaacgcagcg
gtggatgtcagctttgctaaacgccagctcaatacgtcagttatggtagaagatggccag
atgattgtactgggtggtttgattgacgagcgcgcacaagaaagtgaatctaaagttccg
cttctgggcgatattccttacttaggccgtctatttaaatcgaccagctctcagctacaa
aaatccaatctaatggtattcattaagccaaccatcattcgcgatggtgtgaccgcagat
ggtattactcagcgtaaatacaactttattcgtgctgagcagctttacaaggcggaccaa
ggtctgagattgatggaagacgtgcaaacgcctgtgctgcctaagtttggtgaagatatt
agtcaccctgctgagattcaggctttcctagaccaaatggaaactaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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