KEGG   Vibrio cholerae O49 1154-74: VAA049_239
Entry
VAA049_239        CDS       T03828                                 
Symbol
groL
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
vcx  Vibrio cholerae O49 1154-74
Pathway
vcx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VAA049_239 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcx03019]
    VAA049_239 (groL)
   03110 Chaperones and folding catalysts [BR:vcx03110]
    VAA049_239 (groL)
   03029 Mitochondrial biogenesis [BR:vcx03029]
    VAA049_239 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcx04147]
    VAA049_239 (groL)
Enzymes [BR:vcx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     VAA049_239 (groL)
Messenger RNA biogenesis [BR:vcx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VAA049_239 (groL)
Chaperones and folding catalysts [BR:vcx03110]
 Heat shock proteins
  HSP60 / Chaperonin
   VAA049_239 (groL)
Mitochondrial biogenesis [BR:vcx03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    VAA049_239 (groL)
Exosome [BR:vcx04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VAA049_239 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   VAA049_239 (groL)
  Exosomal proteins of breast cancer cells
   VAA049_239 (groL)
  Exosomal proteins of colorectal cancer cells
   VAA049_239 (groL)
  Exosomal proteins of bladder cancer cells
   VAA049_239 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AKB04972
UniProt: A0A085PUT7
Position
258564..260198
AA seq 544 aa
MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV
AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV
ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA
ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDMGMGGM
GGMM
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggctgctaaagacgtacgttttggtaatgacgctcgtgtaaaaatgctagaaggcgta
aacattctggccgatgcggtaaaagtgaccttaggtcctaaaggccgtaacgtagttctc
gacaaatctttcggtgcaccaaccattactaaagatggtgtatcagttgcgcgtgaaatt
gaactggaagacaaattccagaacatgggcgcacaaatggtcaaagaagtcgcttctcaa
gccaacgacgcggcgggtgacggtaccaccacagccaccgtactggctcaagcgattgtg
aacgaaggcctaaaagcggtcgcggcgggcatgaacccaatggatctgaagcgcggtatc
gataaagcggttatcgctgcggtagaagagttgaaagcactgtctgtaccttgtgccgat
actaaagcgattgcccaagtaggtaccatctctgctaactcagactctagcgtgggcaac
atcattgctgaagcgatggaaaaagtgggtcgtgacggcgtgatcaccgttgaagaaggc
caagcgctgcaagatgagctggatgtggttgaaggtatgcagtttgaccgtggctacctg
tcaccgtacttcatcaacaaccaagaatcaggcagtgtagaactggataacccattcatc
ctgctggtggataagaaaatctctaacatccgcgaactgttgccagtactggaaggtgta
gcgaaagcctctcgtccactgctgatcgtggctgaagatgtggaaggcgaagcgctggcg
actctggttgtcaacaacatgcgcggcatcgtgaaagtggcagcggttaaagctcctggc
tttggcgatcgtcgtaaagcgatgctacaagatatcgcgatcttgactggcggtgttgtg
atctctgaagagatcggtctggagctggaaaaagcgactctggaagacctaggccaagcg
aaacgcgtttctatcaccaaagagaactcaaccatcatcgatggtgctggcgatcaagcc
gcgatccaaggtcgtgttgcgcagatccgtcaacaaatcgaagaagccacttctgactac
gacaaagagaaactgcaagagcgcgtagcaaaactggctggcggcgttgcagtaatcaaa
gtgggcgcagcaaccgaagtggaaatgaaagagaagaaagatcgcgtagaagacgcgctg
cacgcgactcgcgcggcggtagaagaaggcgttgttgcgggtggtggtgtagccctgatc
cgcgcagcttctaaactctcttctctggtgggtgacaacgaagagcaaaacgtgggtatc
cgtgtcgcactacgtgcgatggaagcgccactgcgtcaaatcgtgaaaaacgcgggtgac
gaagaatcagtggttgccaacaatgtgcgtgcaggcgaaggtaactacggttacaacgcg
gcaacgggcgtgtacggtgacatgatcgaaatgggtattctggatccaaccaaagtaacc
cgttctgctctgcaattcgcagcgtctgttgcgggtctgatgatcaccactgaagcgatg
atcactgagctgccgaagaaagatgcaccagcaatgccagacatgggcatgggtggcatg
ggcggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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