KEGG   Vibrio cholerae O49 1154-74: VAA049_2707
Entry
VAA049_2707       CDS       T03828                                 
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
vcx  Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcx03021]
    VAA049_2707
Transcription machinery [BR:vcx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VAA049_2707
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 GerE
Other DBs
NCBI-ProteinID: AKB03907
Position
2993301..2993864
AA seq 187 aa
MSILNLFGKKDTSRPVNNDMDRQRKYEALVRAYHRDLYRYAYWLCKDRSIAEDLVQETCL
RAWKSLDSLLDEKAAKAWLITILRRENARRFERKQFDLVDIDEHDYEAKYTDDEHHQNEW
LQNQILKLDVEYREPLFLQVVGGFSGEEIADILSLNKNTVMTRLFRARNQLKEMMDGSAH
YPEQHNG
NT seq 564 nt   +upstreamnt  +downstreamnt
gtgtcgatattgaatttatttggaaagaaagacacaagtcgtccggtcaataatgatatg
gacagacaaagaaaatacgaggcactggttcgtgcttatcatcgcgatctttaccgttat
gcttactggctatgtaaggatcgctcgattgccgaagacctagtgcaagaaacctgctta
agagcttggaagtcactcgacagcttgttagatgaaaaagcggctaaagcatggttaatc
accattttacgcagagaaaatgctcgccgttttgagcgtaaacagtttgatttagttgat
attgatgaacacgactatgaagccaaatacaccgatgatgaacatcatcaaaacgagtgg
ttacagaatcaaattttaaaactagacgtagagtatcgagagcccctttttttacaggtt
gtaggtggattcagcggtgaagagatcgccgacattctttcactcaacaaaaacacggta
atgacacgtttgtttagagcacgcaaccaactgaaagagatgatggatggttcagcacac
tacccggagcagcacaatggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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