KEGG   Vibrio cholerae O49 1154-74: VAA049_53
Entry
VAA049_53         CDS       T03828                                 
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
vcx  Vibrio cholerae O49 1154-74
Pathway
vcx00730  Thiamine metabolism
vcx01100  Metabolic pathways
vcx01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    VAA049_53 (thiC)
Enzymes [BR:vcx01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     VAA049_53 (thiC)
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: AKB02218
Position
52634..54571
AA seq 645 aa
MSNRKQARLEAKRFIDTLSVEPYPNSHKSYLLGSRPDIRVPVREITLSDTLVGGSKYAPI
FEPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLAD
ETLDELRYGHLPRIRRAIGQHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQ
HAGQNFGANLPELITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
SHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTKIAW
EYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWFGCAMLCYVTPKEHLGLPNKDDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR
FEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQ
RLDTTVIDLVMPAESIQQAMQDKSREFLASGSELYHPLVKEPIEE
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgtcgaaccgtaaacaagcaagactggaagccaagcgctttattgataccctttctgtt
gaaccctatccgaactctcacaaatcttacctattaggttctcgccctgatattcgggta
cctgtcagagaaattactctcagcgatactttggtcggtggcagtaaatatgcacccatc
tttgagcccaatgagcctatctgtgtgtatgacacatctggcgtctatactgacccttca
catgatattgatctctacaaggggcttcctaagctcagagaggagtggattgaagagcgt
cgagatacgcacattctgcctagtatgagctctcatttcgcccgtgaacgcttagcggat
gaaactctagatgaactgcgttatggacatttaccgcgaattcgccgagcgataggccag
catcgagtcactcagttacattacgcacggcagggaatcattacgccggaaatggagttt
gtggcgatccgtgaaaactctcgtcgtcttgctcatcaagatccaagtctacttcagcag
catgctgggcagaattttggtgctaatttgcctgaactgattactcctgagtttgtgcgt
cgtgagattgcagaagggcgcgctattatcccatgcaatattaatcatcctgaatctgaa
cccatgattattggccgcaatttcttggttaaggtaaatgccaatatcggtaactcttct
gttagctcttctattgaagaagaagtcgagaagttagtttgggcgacccgctggggcgca
gatactgtgatggatctgtcgacagggcgaaatatccatgaaacccgtgagtggatctta
cgcaatagccccgtgccaattggtactgtacctatgtatcaggcgctggaaaaagtgaat
ggtgtagcagaaaacctcacatgggaagtgatgcgcgataccttactagagcaagctgag
caaggtgtggactattttacaattcatgcgggcttgttattgcgctatgtgccgatgaca
gcgaagcgcgtaacggggatcgtttctcgtggcggctcgattattgcgaaatggtgtctg
tctcaccatcaggagaattttctttatacccattttcgtgaaatctgtgagatttgtgcg
caatatgatgtggctctgtccctaggggatggacttcgtcctggctcgattgctgatgct
aacgatgaagcacaatttgctgagttacgtacccttggtgagctaaccaaaatagcttgg
gaatatgatgttcaggtcatgattgaagggccggggcatgtacctatgcacttaattaaa
gccaatatggatgagcagctcaagcattgtcatgaggcgccattctacacccttggtcca
ttaacgaccgatattgctcctggctatgatcacatcacctctggtatcggtgcggccatg
attggttggtttggctgcgccatgctctgctatgtcacacctaaagaacatttgggtctg
ccgaataaagacgatgtcaaaacaggattgattacttataagttagcggcccatgctgct
gatttggcgaaagggcatccgggagcacaaattcgtgataatgcattatcaaaagcacgt
tttgagtttcgttgggaagaccagttcaatcttgcgcttgatcccgtcacagcgcgcgct
ttccatgatgagacgctaccgcaggaatcgggaaaagtggcgcacttttgctctatgtgt
ggccctaaattctgctcgatgaagatctcgcaagaggtcagggattacgcaaataaccag
agattagacaccaccgttattgacttggtcatgcctgcggaatctatacagcaggcgatg
caagataagtctcgtgagtttttagcctcaggttctgaactctatcatcctttggtgaaa
gagccgattgaggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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