KEGG   Vibrio coralliilyticus RE98: IX92_11605
Entry
IX92_11605        CDS       T03444                                 
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
vcy  Vibrio coralliilyticus RE98
Pathway
vcy00550  Peptidoglycan biosynthesis
vcy01100  Metabolic pathways
vcy01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:vcy00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    IX92_11605
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    IX92_11605
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vcy01011]
    IX92_11605
Enzymes [BR:vcy01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     IX92_11605
Peptidoglycan biosynthesis and degradation proteins [BR:vcy01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   IX92_11605
SSDB
Motif
Pfam: Transpeptidase PBP_dimer SURF1 DUF5798
Other DBs
NCBI-ProteinID: AIW19651
UniProt: A0A7Y4DV55
Position
1:2504068..2505951
AA seq 627 aa
MLRKRTRIRDYQEEARLFKSRAIVAFIGIVTMVGLLVANLYNIQINQYQDYKTRSNDNRI
KVVPIAPNRGLIYDRNGQLLAENRPVFNLEITPEKIKDMEATITGLQEFIEITPEQVERF
ERERRQTRRFKSVPILTQLTQEQVAKFSVNQHKFPGVAVNASLKRHYPYGDVLTHVIGYV
SRINDRDMQRLIREEKDANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRIIRTL
KYIPPVPGKDIVLNLDINLQLYIHELLAGRRGSAVVLDPKDNGVLAMVSSPSYDPNAFVH
GISGKAYSALLNDKNRPLVNRATLGIYPPASTIKPFLAVAALEEGVITPYTTRNDPGYWK
IPNSKTRPFRDWLRWGHGKVNIVKSIEESVDTFFYQIAYDMGIDRISRWMMMFGFGEKTG
IDIYEESKANMPTREWKMARHRVPWYQGDTIPVGVGQGYWTATPMQIAKATSVLVNRGEV
IAPHLLRATIDNGQQFDKQVMSEIETYPPITDVKEKFWDLSIEGMRLVNHGKKGTARRSF
YNTPYVSGGKSGTAQVFGLAEDEEYNADEIAEHLRDHALFTGFAPLEEPEVVVTVVLENA
GGGSSQGGPVVRQVFDRVLVEDKEAKE
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgttaaggaagcgtacccgaatcagggattatcaagaagaagcacggctgtttaaaagc
cgggctatcgtcgctttcattggtattgtcactatggttggcctgttagtggccaacctc
tataacatacagatcaaccaataccaagattacaaaacccgctcaaacgacaaccgtatt
aaagtcgtccctatcgcgccaaaccgcgggttgatctatgaccgcaatggtcaactgctc
gcagaaaatcgacctgtctttaatttggaaattactccagaaaaaattaaagatatggaa
gccactatcactggtcttcaagagttcattgaaataactccagagcaagtcgaacgcttc
gagagggaaagacgccagacccgacgtttcaaatcagtgccaatactgactcagctcacg
caagaacaggtcgccaaattttcggtcaatcagcataagtttcccggtgttgctgtcaac
gcaagcttaaaacgccattacccatacggcgacgtcttgacccatgtaattggttacgta
tcacgcatcaatgaccgcgacatgcagcgcttgatccgcgaggaaaaagacgccaactat
caagcgacacgtgatatcggtaagcttggtatcgagcgttattacgaagatctgcttcac
ggaacggccggttatcaggaagtcgaagtcaatagccgcggtcgtattatccgcacgtta
aagtacattccgccagttcccggcaaagacatcgtgcttaacctcgatataaatttgcag
ctctacattcacgaattactcgctggacgtcgtggtagtgccgtagtgctcgatcccaaa
gacaacggtgtcttggccatggtctcgagcccgagctacgaccccaatgctttcgtgcat
ggcatttctggcaaagcctacagtgctcttctcaacgataagaaccgtccattggttaac
cgagccactctcggcatttatccaccagcatcgacaattaaaccatttttagcggtagcg
gctctggaagaaggcgtcatcactccatacaccacgcgtaatgaccctggttactggaag
attcctaactctaaaacaaggcctttccgagattggctacgttggggacacggtaaagtt
aatatcgtcaaatcgatagaagagtccgtggataccttcttttatcagatagcctacgac
atgggcatcgatcgaatctctcgctggatgatgatgtttggttttggtgaaaagaccggc
atcgatatctatgaagaaagcaaagcaaacatgcccactcgtgaatggaaaatggctcgt
caccgtgtaccttggtatcagggagacaccattcctgtcggcgtaggccaagggtattgg
acagcaacaccgatgcaaattgccaaagcgacctctgtgttggttaaccgaggcgaagtg
atcgcacctcacctattgagagcaaccatcgacaatggccagcaattcgataagcaagtg
atgtctgagatcgagacttacccgccaattactgacgttaaagaaaaattctgggatttg
tcgatagaagggatgcgactggttaaccacggtaaaaaaggcacagcaagacgctccttc
tacaatacgccttacgtcagtggcggtaaatctggtactgcgcaggtattcggtctagca
gaggatgaagaatacaacgcagatgaaattgctgagcacttaagagatcacgctctattt
accggctttgctccattggaagaacctgaagtggtagtgacggtcgtacttgaaaatgcg
ggcggaggctcttcacaaggtggccctgtggtcaggcaggtctttgaccgcgtgttagta
gaagataaagaggcgaaagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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