KEGG   Vibrio cholerae O27 10432-62: VAB027_160
Entry
VAB027_160        CDS       T03829                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein D
  KO
K02453  general secretion pathway protein D
Organism
vcz  Vibrio cholerae O27 10432-62
Pathway
vcz03070  Bacterial secretion system
vcz05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAB027_160 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VAB027_160 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcz02044]
    VAB027_160 (gspD)
Secretion system [BR:vcz02044]
 Type II secretion system
  General secretion pathway protein
   VAB027_160 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: AKB06689
Position
170166..172193
AA seq 675 aa
MKYWLKKSSWLLAGSLLSTPLAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
VDVRSFDTLNEEQYYSFFLSVLEVYGFAVVEMDNGVLKVIKSKDAKTSAIPVLSGEERAN
GDEVITQVVAVKNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEII
RRVDQAGDKEIEVVELNNASAAEMVRIVEALNKTTDAQNTPEFLKPKFVADERTNSILIS
GDPKVRERLKRLIKQLDVEMAAKGNNRVVYLKYAKAEDLVEVLKGVSENLQAEKGTGQPT
TSKRNEVMIAAHADTNSLVLTAPQDIMNAMLEVIGQLDIRRAQVLIEALIVEMAEGDGIN
LGVQWGSLESGSVIQYGNTGASIGNVMIGLEEAKDTTEKKPIRNSETGEIKYYEETTTKG
DYSKLASALSGLQGAAVSIALGDWTALINAVSNDSSSNILSSPSITVMDNGEASFIVGEE
VPVITGSSAGSNNDNPFQTVDRKEVGIKLKVVPQINEGNSVQLKIEQEVSNVLGANGAVD
VRFAKRQLNTSVMVQDGQMLVLGGLIDERALESESKVPLLGDIPLLGQLFRSTSSQVEKK
NLMVFIKPTIIRDGMTADGITQRKYNYIRAEQLFRAEKGLRLLDDASVPVLPKFGDDRRH
SPEIQAFIEQMEAKQ
NT seq 2028 nt   +upstreamnt  +downstreamnt
gtgaaatattggctgaaaaaaagttcatggctgttggcaggcagtttgctgtctacccct
ctagcgatggcaaacgagtttagcgccagctttaaaggcaccgacattcaagaatttatc
aatattgtgggacgcaatcttgagaaaaccatcattgtcgacccttcggtacgcggcaaa
gtcgatgtgcgcagttttgataccttaaacgaagagcaatattacagtttcttcctcagt
gtgctcgaagtgtacggtttcgccgtcgttgaaatggataatggcgtactgaaagtcatc
aaatcgaaagatgcaaagacctcagccattccggtgttgagtggtgaagaacgtgccaat
ggcgatgaagttattacccaagtggtcgcggtaaaaaacgtttccgtacgtgagttgtcc
cctttgctgcgccaactgattgataacgcaggagcgggtaacgtagtgcactacgatccg
gcgaacatcattttgatcacggggcgagctgcggtagtgaaccgtttagcggaaattatt
cgtcgcgttgaccaagccggtgacaaagagattgaagtggttgagcttaataatgcatcg
gctgctgaaatggtgcggattgttgaagcgctcaacaaaacgacagacgcgcaaaacaca
cctgaattcttaaagcccaagtttgtggcagacgagcgtactaactcgattttgatttct
ggcgatccgaaagtgcgcgagcgcctcaagcgtctgatcaagcagttggatgtcgagatg
gcggccaaaggcaataaccgcgtggtgtatttgaaatacgccaaagctgaagatctggtc
gaagtactgaaaggggtgtctgagaacctgcaagcggaaaaaggcaccggacagccgacc
acttcaaaacgtaatgaagtgatgattgctgcgcacgctgacaccaactcgttagtgctt
actgcgccgcaagacattatgaatgcgatgctggaagtgattggacagctagatattcgt
cgtgcgcaagtgttgattgaagcgctgattgtcgaaatggcagagggcgatgggatcaac
cttggtgtgcagtggggctcgctggaaagtggttcagtcatccaatatggcaacactggc
gcgtcgattggcaatgtgatgatcggccttgaagaagccaaagacaccacggagaaaaaa
ccgatccgtaatagtgaaacgggtgagatcaaatactacgaagagaccacaaccaaaggc
gattactcgaagttggcatcagccctgtctggtttgcaaggtgctgcggtcagcatcgca
ctgggcgattggacggccttaatcaacgcggtctctaatgattccagctcgaatattttg
tcatcacccagcattacggtgatggataacggtgaagcctcctttatcgtgggtgaagaa
gtgccggttatcacgggttcttctgctggttccaataacgataacccattccaaacagtg
gatcgtaaagaagtcggtatcaagcttaaagtggtgccgcagatcaacgaaggcaactca
gtccagctcaagattgagcaagaagtctcaaacgtgttgggcgccaatggagcggtagac
gtgcgttttgcgaagcgtcagctcaacacttctgtgatggtgcaagatgggcagatgttg
gtgctcggcggtttgattgatgagcgagctctcgagagtgagtccaaagtcccgctcttg
ggggatattcctctgctgggtcaactgttccgctcaaccagctcgcaagtggaaaagaaa
aacctgatggtgtttatcaagccgaccattattcgtgatggcatgacggccgatggcatc
acccaacgtaaatacaactacatccgcgccgagcaactgttccgcgccgaaaaaggttta
cgtctgctggatgatgctagtgtgcctgtgttgccgaaatttggcgatgaccgccgccat
tcacctgaaattcaagcctttattgagcagatggaagccaagcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system