KEGG   Vibrio cholerae O27 10432-62: VAB027_2299
Entry
VAB027_2299       CDS       T03829                                 
Name
(GenBank) bacterial regulatory s, luxR family protein
  KO
K13246  c-di-GMP phosphodiesterase [EC:3.1.4.52]
Organism
vcz  Vibrio cholerae O27 10432-62
Pathway
vcz05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VAB027_2299
Enzymes [BR:vcz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     VAB027_2299
SSDB
Motif
Pfam: EAL Response_reg GerE Sigma70_r4_2 Sigma70_r4 Sigma70_ECF Reovirus_L2_7th HTH_23 Terminase_5
Other DBs
NCBI-ProteinID: AKB08553
Position
complement(2505463..2507217)
AA seq 584 aa
MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDG
ISLLSQLSLQAPKLGVIILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEG
VQKQTEPKTSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTH
GMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQ
LPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVD
TCQGYYAAKPMPIAQLSELYTKNRRQRLGGQSMDDGWQILLVDNHMLSATALQKVLNKEE
NVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGAVLVLHDGL
TAEAQPDEPKAIVVKANTLMETSSRILQQAQQSTVRPQAQQEKLAQLSERELTVAKMLVE
GLTNKEIALQLEINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgaaaataatgatagtagaagatgatcgaattcaggcgacgagcctgaagctcaagcta
agacagcttgggttggatgacgtcatcttggctgaaaacggatttgctgccttagaactg
tgtaacaaagtgggtatcgatttgatgttttgcgatattcgaatgccgcagatggatggg
atcagcttgttatcacaactgagtttacaggcacctaagctgggtgtgattatactcagc
gcggtggaagatacgattcttgagttaactcacaacatgtgtagtttggctggatttgct
tatgttgatcgcctacctaagccctacgaagtggaggatttacagcgtgttgtcgagggg
gttcaaaagcaaacggagcctaaaaccagtcacaaacctgcaatcacgctaacctgtgac
gagattgaacaagcttttctgcacgaccatatttttaattactatcaaccacagtttgat
tttcgcagtggggcgatggtcggcgttgaagcgctagtacgttacgagcatcccactcat
ggcatgttaagtccagcggtgtttctgcctttaattgagcagtgtggcttgcatgagaaa
ctcttccttaccgtattagaaaagtcggtctctgcattggctagtattggtgctgacttg
cagctttccgtcaacatcagccaacgcaacttgcaacactcgatctgtgatcctattctc
gccatctgtgagcggtatggttttcccgcaagcaaactgactctagagatgacggagcat
gaggtgtacaacggaaccccgacctcattggctaaccttgctcgactgagaatgtatggc
gttgggctatcgattgatgattttggtacgggctacgcgtcattaggtcaactggctcaa
ctgccttttacggaactcaagattgatcgcagctttgtgcatgatttagcaaccaactac
aaacaccaacaattgaccaatatgtgtttgttgctggctcaatctttggggttgcactgc
gtcgtcgaaggggtagagaacgaagagacatggcaatacttacgtcaacttggggtagat
acctgccaaggttactacgccgctaagcccatgccgattgctcagttgagcgagctttac
actaaaaatcgtcgccaacgtttaggtggtcaaagtatggatgatggctggcaaatcttg
ctggtggataaccatatgctcagcgccacggcattacaaaaagtgctcaataaagaagag
aacgtcagcaaggtgtttgtggcacaagatattgagcagacgctgcacaaactgcgcgat
ttaccgatcaacctgctggtcgtcgaaagtcggtttttatcgacaatcagtcctgcggca
tttcacgagttgcttgagccttactatcgaggggctgtcttggtgctgcatgatggatta
accgctgaggctcaaccggatgagcccaaagccatcgtcgtcaaagcgaatactttgatg
gaaaccagttctcggatcttacagcaagcgcagcagagcactgtgcgcccacaggcgcaa
caagaaaagcttgctcagctttctgagcgagagttgacggttgcgaaaatgttagtagaa
gggctgacaaataaggaaatcgccctacaactcgaaatcaatcaaaaaacagtaagcact
tacaagactaggattatgaccaagttagggattaaatcggccatggagttggtgcgtttt
gtaacattaaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system