KEGG   Vibrio cholerae O27 10432-62: VAB027_2990
Entry
VAB027_2990       CDS       T03829                                 
Name
(GenBank) apurinic endonuclease family protein
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
vcz  Vibrio cholerae O27 10432-62
Pathway
vcz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VAB027_2990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcz03400]
    VAB027_2990
Enzymes [BR:vcz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     VAB027_2990
DNA repair and recombination proteins [BR:vcz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     VAB027_2990
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AKB08010
Position
complement(3240769..3241629)
AA seq 286 aa
MYEKLIGAHVSASGGVELAPVRAHEIGANAFALFTKNQRQWAAKPLEASSIRAFKANCKK
WGFGSEAILPHDSYLINLGAPEPEKLDKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVS
EEACLATIAESINLAHRQVPNVIAVIENTAGQGSNLGWRFEHLAAIIDQVEDKDRVGVCL
DTCHTFAAGYDLRTKAACDETFAEFERVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGE
IGWECFEYIAQDARFNGIPLILETIDPDIWATEIATLRKFSTQKEN
NT seq 861 nt   +upstreamnt  +downstreamnt
atgtatgagaagttaatcggggcacatgtatcggcctctggtggtgtcgagctagcgcca
gttcgagctcatgaaatcggagcgaatgcttttgctctcttcaccaaaaaccagcgccaa
tgggcagctaagccactggaagcgagcagcattcgtgctttcaaagccaattgtaaaaaa
tggggatttggcagtgaggcgattttgccgcacgactcttatctgattaatttaggggct
ccggagcccgagaagcttgacaaatcacgagccgcttttgtcgatgaaatgctgcgttgt
gatcagttagggttaactttgcttaactttcatcccggtagtcatttacagcaggtctct
gaagaggcgtgtttagcgacaattgctgagtcaattaatcttgcgcatcgtcaagtaccg
aatgtgattgcggtgattgaaaataccgcagggcaggggagtaacttaggttggcgtttt
gagcatctggcggcaatcattgaccaagttgaggataaagatcgggttggcgtatgccta
gatacttgtcacacctttgccgcagggtatgacttgcgtacgaaagccgcgtgtgatgag
acattcgctgagtttgagcgagtggtcggtatgcactatttgcgcgcaatgcacatcaat
gattcaaaaggtaagctggctagccgcgttgaccgtcatcattccttaggtatgggagag
attggctgggagtgttttgaatatatcgcgcaagatgctcgatttaacggtatccctctg
attttagaaacgattgatcctgacatttgggcgactgagatcgcaacgctacgcaaattt
tcgacgcaaaaagagaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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