KEGG   Vibrio cholerae O27 10432-62: VAB027_3252
Entry
VAB027_3252       CDS       T03829                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
vcz  Vibrio cholerae O27 10432-62
Pathway
vcz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VAB027_3252 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcz03019]
    VAB027_3252 (pcnB)
Enzymes [BR:vcz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     VAB027_3252 (pcnB)
Messenger RNA biogenesis [BR:vcz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     VAB027_3252 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: AKB07041
Position
3556104..3557477
AA seq 457 aa
MNNNDFEPSNTRTYPDLALTIIPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVR
DLLLGGKPKDFDVATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVATFRGHHQES
SQSQNIAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDLEDR
LVRLIGDPETRYREDPVRMLRAVRFAVKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEES
LKMLQAGHGLETYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLDLVLDATDIRVEEDL
RINPAFMFAAMLWYPMIDLADRLMESLNLNEFDAMTEASNRILDEVVKRIAIPRRHTTTI
RDIWQLQQRLPRRSGKRAFRLLELNKFRAGFDFLEMRGEIEGGETKQLAEWWATFQSAGR
NMRQAMVGDIGNATSSSKSGARRRKPSRNKSKSKSSE
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgaataataacgattttgaaccgagcaacactcgcacatatccagacttagctttgacc
atcattccgcgtcaggaacaccctatctcgcgtcagcagatcagcgaaaatgcgctgaaa
gtgctctatcgtctgcatggtgcggggtttgaggcctttctggtcggcggcggtgtgcgt
gatttacttctgggtggcaagccgaaagactttgatgtggccaccaacgcaacccccgag
cagttacgccaactgtttcgcaactgccgtctgattggtcgccgtttccgtctcgcgcac
attatgtttggacgcgacatcgtcgaagtcgccactttccgtggccatcatcaagagtcg
agtcagagccaaaatatcgctgcacaatccgaagcgggtatgctgctacgtgataacgtg
tacggaacgattgatgaagatgccgagcgccgcgatttcaccatcaatgccatgtattac
aacattgccgactacagcatccacgactatgccggcggcatggaagatctggaagatcgt
ttggtgcgcctgattggcgatccggaaacgcgttatcgtgaagatccggtacgcatgctg
cgcgcggtgcgttttgcggtcaaactcgattttgatattgaagaagataccgcggcgccg
attgagcaacttgcgccattgctgcgtgacattcctgcggctcgtctctacgaagagtcg
ctcaaaatgctgcaagcaggtcatggtttagaaacctaccacttaatgcgtcaatacaat
ctgttccagcagctttttccaaccatcgccgagcattttaccgccgaccacagttcaaaa
accgagcagatgttggatttggtgctggatgcgaccgacattcgagttgaagaagatctg
cgcatcaatccggcctttatgtttgccgccatgctgtggtatccgatgattgatctcgcg
gatcgcttaatggaatcgctcaacctaaatgaatttgatgcaatgaccgaagccagcaac
cgcatcttggatgaagtggtcaaacgcatcgcgatcccgcgtcgccataccaccaccatt
cgtgatatctggcagttgcagcagcgcttaccccgtcgcagtggtaaacgagccttccgt
ctacttgaactgaacaagttccgtgcaggctttgatttcctcgaaatgcgtggcgaaatt
gaaggcggtgaaaccaaacaactggcggaatggtgggccaccttccaaagcgcgggacgt
aatatgcgccaagccatggtgggtgatatcggtaatgcaacgagcagcagcaaatctggt
gctcgccgccgtaaaccatcccgcaacaaatccaagagtaaatccagcgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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