KEGG   Verticillium dahliae: VDAG_08006
Entry
VDAG_08006        CDS       T03450                                 
Name
(RefSeq) RING finger protein
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
vda  Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:vda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vda04131]
    VDAG_08006
   04121 Ubiquitin system [BR:vda04121]
    VDAG_08006
Enzymes [BR:vda01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     VDAG_08006
Membrane trafficking [BR:vda04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    VDAG_08006
Ubiquitin system [BR:vda04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    VDAG_08006
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4_3 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-ANAPC11 zf-RING_16 zf-P11 zf-RING_6 zf-RING_4
Other DBs
NCBI-GeneID: 20709469
NCBI-ProteinID: XP_009651067
UniProt: G2XCX4
Position
2
AA seq 679 aa
MLANTNGKRIRFMDSCARGAKAKQQKSFISLENDPRDFHDAPSPLSSGDGPRGPRRADSD
SDPDEADIEEHLHQGPHGFNIHRSTWGNPHGDEQGGRQPPDPANGDQVIGRFLELLSTFG
HGAQGGPDFDHDHPQRPPQPFGSSPFGGSGNVRTFTTRRGNGFTSFTIATGPIHVQGGGR
ARAFGRPSEDQAQGQGHDDFQSVFSNILTGAGPPQQPHGEDMPGQGPRPRAAGAQNLAAS
LHQILNMLAPGNGQFGDAVYTQEALDRIISNMMETNPQSNAAPPASEDAIGKLQRKAVDD
EMLGPEGMAECTICIDELKKGEEVVYLPCKHWFHDTCVVMWLKEHNTCPICRTPIEERTE
SASGGQQGDGGEGSGRPAPGPSNSAPPGGGQPPPFFGFGMPSPHGDGAPPPNSTGGWGYA
APPQPPHPSTRPVHTRQFHWSFQLPQNGPAGNTRGEGSSRSPRGYDIFPPRPYDSQSSSR
QSSQRRHSMSPPATNTGSRTRQRSPTPSSWNRGHQQAGTGQAQNQTQSQGGPLSWLRNRL
SRSGPSDGPPPDGPGRDVLADLVVSQVGERVAKVKCYQDVVGSAKRSVPGPRGFPHQIKH
VAVGLEKGIEWGAPDRSAERQHNKAWQAWHQRGWTCAAATRQRHSVARCAHWPRQWRVPP
PAADEKRSSAILPSFLPPL
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgcttgcgaacacgaatgggaaaaggatacgcttcatggactcgtgtgcccgcggtgcg
aaagcgaagcaacagaaatcgttcatttccctagagaacgaccctcgcgacttccacgat
gccccatcgcctctctcctccggcgacggtccccgtgggccccgcagggcagactccgac
tccgaccccgacgaagctgatattgaggaacacttgcaccaaggcccccatggatttaat
attcatcgatccacgtggggtaatcctcacggagatgaacaaggcgggcgccagccgcct
gatcccgccaacggggaccaggtgataggccgcttcctcgagcttctgagcacatttgga
cacggagcacaaggcgggccagactttgaccatgatcacccgcaaaggcctccccaacca
ttcggcagcagtccgtttggcggttctggaaacgtgcggacgttcactactaggcgaggg
aacggtttcacaagcttcacaatcgctaccggaccgatccatgttcaaggcggtggtcgg
gctcgagcatttggacgcccgtccgaagaccaggcgcaggggcagggtcatgatgatttt
cagtcagtcttcagcaacattctcaccggcgccggtccaccacaacagccgcatggtgaa
gacatgcccggacaaggcccacggccccgcgccgccggtgcccagaaccttgctgcgagt
ctgcatcaaatcttgaatatgttggcaccaggaaatggtcaatttggcgatgcggtctac
acgcaagaagctctcgaccggatcatttccaacatgatggagacgaatccgcagtcaaac
gccgcgccgccagcctcagaggacgccatcggcaaattgcaacgcaaggcagtggatgac
gagatgctgggccccgaaggcatggccgagtgtaccatttgcatcgatgagctgaagaag
ggtgaggaagtggtatacctgccttgcaagcactggttccatgacacgtgcgttgtgatg
tggctcaaggagcacaacacttgtcccatttgtcgaacaccgattgaggagaggaccgaa
agcgcgagcggtggtcagcaaggtgatggaggggaggggagcggcagaccggcacccgga
ccatcgaactcagcgccacccggtggtggacaacctcccccgtttttcggattcggcatg
ccaagtccccacggcgatggcgctcctccccccaacagcacaggcggctggggctatgct
gctccgccgcaaccgcctcacccgtcgacgcggcctgtacatacacggcaattccactgg
tccttccagttaccacagaatgggccagcgggcaacacgaggggcgagggcagctcccgc
agccctcggggatatgacatcttcccaccgagaccgtacgactcacagtcttcgtctcga
cagtcgtctcagaggcggcactcgatgtctccaccagcaacgaacacgggctctcgcact
aggcaacgaagcccaacaccgagcagctggaatcggggacaccagcaggcagggacaggc
caagcacagaaccagactcaatcacagggtggtccgcttagttggctgaggaatcgcctg
tccaggtctggtccgagtgacgggccgcccccggatggaccaggacgagatgtattggca
gatctggtggtgagccaggtcggagagagagtggccaaggtgaaatgctaccaagatgtg
gtggggtctgctaaacggtctgtgccaggaccccgcggtttcccccaccaaatcaagcat
gtcgccgtaggcttggaaaagggcatcgagtggggcgcacccgatcgctccgcggagcga
cagcacaacaaagcatggcaagcatggcatcagcgtgggtggacatgtgccgctgcaacg
agacaacgccattccgtggcgaggtgtgctcactggccccgtcaatggagggttccccca
ccggctgctgatgagaagaggtcgagcgccattcttccttccttcctccctcccctgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (26)   

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