KEGG   Verticillium dahliae: VDAG_08884
Entry
VDAG_08884        CDS       T03450                                 
Name
(RefSeq) ribonuclease
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
vda  Verticillium dahliae
Pathway
vda03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VDAG_08884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vda03019]
    VDAG_08884
   03009 Ribosome biogenesis [BR:vda03009]
    VDAG_08884
   03036 Chromosome and associated proteins [BR:vda03036]
    VDAG_08884
Enzymes [BR:vda01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     VDAG_08884
Messenger RNA biogenesis [BR:vda03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VDAG_08884
Ribosome biogenesis [BR:vda03009]
 Eukaryotic type
  90S particles
   RNase
    VDAG_08884
 Prokaryotic type
  rRNA processing factors
   VDAG_08884
Chromosome and associated proteins [BR:vda03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     VDAG_08884
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 dsrm
Other DBs
NCBI-GeneID: 20710347
NCBI-ProteinID: XP_009654982
UniProt: G2XG97
Position
5
AA seq 426 aa
MSKRAREEGPTHELQGRPGSSKRPHIDGPPGNDIEPLDVMLAHANKLVKRIEDLRNALQA
GDSSSDIRRREKLTTKLRGTCQDILPSITAFTGEKVASPDAASGASKEHQSSNTHADEGT
IHPPKPSTSAPACSPIPSPLILSAFTTNEIASSLPPLPPIRDPKLETAVFTHYTVGPGLN
YERLEWLGDAYTEIISTSLLFRTFGGFSSGKLSQLRELLICNANLGQYSAQYGLVERVRA
PEEVKASKEKWKKVPGDVFESYVAAVILSDPEHGLERAGEWLKALFSMTIKHQISTISTK
PEHKAVLEMGDLSLLPDKVLNAKVRLGQLIGAKGINLRYEDDTSGPKFDKFHKRLAVHSV
NLYLDGWGEKNKWLGKGTDINKKEAGQKAAQMALDNKAMIKKYSEKKQVLQAAKAAAGED
DDDQEP
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgtcgaagagagcacgcgaggaaggcccgacgcatgagctgcaaggtcggccagggtca
agcaagcgccctcatatcgatggcccgcctggaaatgacattgagcccctcgacgttatg
ctcgcgcatgccaacaaactggtcaagaggatcgaggatttgagaaacgcgcttcaggca
ggagactcgagttctgatattcgtcgacgagagaaactcacaacaaaattacgaggcaca
tgccaagacattctgccttccattacggccttcactggagaaaaggtcgcctcaccagac
gccgcgtcaggggcttcaaaagaacaccagtctagtaacacacatgctgacgaagggaca
attcacccgccaaagccatctacttctgcgccggcgtgctcacctatcccctcgcccctc
attctgtcagcctttactaccaatgagattgcaagctccttgccgccgttgccgcccatc
cgagacccgaagctggagactgcggttttcacacactataccgttggccctggcctgaac
tatgagcgcctcgagtggcttggtgacgcatacactgaaatcatctcgacatccctgcta
ttccgtactttcggaggcttctcatctgggaaattatcccaactgcgggagcttctcatt
tgtaatgcgaacctcggacagtactcagctcagtacggcctcgtcgagcgcgtcagggcg
ccagaggaagtcaaagcgtccaaggagaagtggaagaaggttcccggcgatgttttcgaa
tcatatgtcgcagctgtcatcctctccgacccagaacacgggctggaacgcgccggggag
tggctcaaggccctgttcagcatgacgatcaagcaccagatctcgaccatctcgaccaag
cccgaacacaaagctgtactggaaatgggagacttgtctcttcttccggacaaggtctta
aatgcaaaagttcgcttgggtcaactcatcggcgcaaagggcatcaatctccgatatgaa
gatgacaccagcggtcccaagttcgataagttccacaagcgcctggctgtccatagtgta
aacctgtaccttgatggatggggtgagaagaacaagtggctgggaaaaggcacagacatc
aacaagaaggaggctgggcaaaaggcggcgcagatggcccttgacaacaaggccatgatc
aaaaagtacagcgagaagaagcaagtgctgcaagctgcgaaggccgcagctggcgaggat
gatgacgatcaagagccgtag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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