KEGG   Vibrio diabolicus: AL552_00985
Entry
AL552_00985       CDS       T05332                                 
Name
(GenBank) formate dehydrogenase subunit alpha
  KO
K00123  formate dehydrogenase major subunit [EC:1.17.1.9]
Organism
vdb  Vibrio diabolicus
Pathway
vdb00630  Glyoxylate and dicarboxylate metabolism
vdb00680  Methane metabolism
vdb01100  Metabolic pathways
vdb01120  Microbial metabolism in diverse environments
vdb01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    AL552_00985
  09102 Energy metabolism
   00680 Methane metabolism
    AL552_00985
Enzymes [BR:vdb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.9  formate dehydrogenase
     AL552_00985
SSDB
Motif
Pfam: Molybdopterin Pyr_redox_2 Molydop_binding Fer4_20 Molybdop_Fe4S4 Pyr_redox Pyr_redox_3 NAD_binding_8 Fer2_4 Fer4 Fer4_7 Fer4_6 Fer4_10 Fer4_9 DAO Fer4_8 FAD_oxidored FAD_binding_2 NAD_binding_7 Fer4_2 Thi4 Fer4_16 HI0933_like FAD_binding_3 Fer4_18 Fer4_21 Amino_oxidase GIDA Fer4_22 Fer4_4 AlaDh_PNT_C Fer4_3 Fer4_15 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: AVF92444
Position
2:complement(199517..203785)
AA seq 1422 aa
MIEIVIDGKYRIVEEGLTLLEAAKVCGVEIPSLCGMNKSNEKIPCDLCVVEVESGGTKRA
CDLKVYRGLNVVTQSEQLSEHRRKALNRIMTDHYADCEAPCKTACPAGVDIQSYLYHISQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCESECRRSLVDEPIAIRQLKRHAADADLAAHEA
YVPEKKPAKHRKIAVVGSGPGGLTAGYYLSNEGYDVTVFESMPKAGGWLRYGIPEYRLPK
DILDKEIELMCRNGMQVETNKKLGVDFTLSQLSEGYDAVCLAVGASQAVEMKYPGSELDG
CYLGVDYLKDYVTEQNYVTGKKVAVIGGGNTAIDCARTARRAGADTTLIYRRTRDEMPAE
DYEIVEAEHEGVKFHFLTNPAQNIADENGRVKAIRLERMALGEPDSSGRRSPKPTGEFFT
EAFDTVIAAVSQKPDLSFLENDELSIPLTRWNTSESDAQTMHTGTGNIFSIGDFRRGPAT
AVEAVGDGRVAAKAIDLFLNGDMADMPKPAFNSRKEKKLAQVDPLHFENIQKVARSIMPE
LTPAQREQSFAEVELGFDNDEAMKEAARCLECGCQANTDCALRDYSTEYHAEQHFDVSVD
VSSASVIGHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACREQAVHGVLS
FVSDKNGRPALRPDDRPRFRSDEKGASCSGLTLMGDSKCVQCGACVQACPTGAMVDSRDR
SQGRTEQLKAVDTICTYCGVGCKLTMFVDERQNKIRYVKGADSPVNQGMLCVKGRFGFDF
ISSEERLTTPLIRKDGWLQPATWDEAIQLVASKLSTIKQDFGSNALAGFSSAKTTNEDNY
AFQKFIRRELGTNNVDHCARLCHASSVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTT
SAHPIIASHIKQAIRHHGARLIVADPKRVDMAEHAELYLAHRPGTDVMLLNGVMQQIIKN
GWYDQEYIEERVDGFDTLLQEVMSPAYNLDKVELVTGVKADDIFAMARMIGTAKRTAVYY
SMGITQHTTGHDNVRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNCYPGYQ
KVYNPIVRQKFAIEWDAPNLPSEQGLTLTEIIDAACKREVRGMYIMGENPVLSDPNQAHV
IEGLEALDFLVVQDIFLTETAQYADVVLPSCSFAEKSGHFTNTERRVQRVNAAVKAPGEA
KEDWWIIQAIANAMGSDWHYQCVSEITSEIARVTPQYAGLRWDAITPNGVQWPSNKNNPN
GTRIMHQTQFTRGKGQMVGVPFRYAAELPDEEYPLVLTTGRVLEQFHTGTMTRKTKGLDN
LAGPRAMISVEDAEAIGIHNGQRLKVSTRRGSIEIDAFVTKRMQKGVVFIPFHFVESPVN
RLTTTATDPHAKIPEFKVAAVKIEISETAAQPEPVEEAVHYV
NT seq 4269 nt   +upstreamnt  +downstreamnt
atgatagaaattgtcatcgatggaaaatatagaattgtagaagaggggctaacccttctg
gaagcagccaaagtgtgcggggtcgaaatcccttcactgtgcggaatgaacaaaagtaac
gagaaaattccgtgtgatttgtgtgtggtcgaagtggaaagtggcggaactaagcgcgcc
tgtgatctcaaagtgtaccgcggtctcaatgtcgtcacacaatcagaacaacttagtgag
caccgcagaaaagcgctcaaccgaatcatgacggaccactacgcagactgtgaagctcca
tgcaaaacggcgtgtcctgctggggtagacatccaatcttatctctaccatatctcgcaa
aacgatcatcaaaaagcgattgaagttattaaacgcacactaccaatgccgttatcgatt
gggcgtgtgtgtccggcattctgcgaaagtgagtgtcgccgttctttggtggatgagccg
attgccattcgccaactcaaacgccatgccgcagacgcagatttagcggcgcatgaagcg
tatgtcccagagaaaaaaccagcgaagcatcgcaagatcgccgttgttggtagtggcccc
ggtggcttaacggcaggttattacttgtcgaatgaaggttatgacgtcaccgtatttgag
tccatgccaaaagcaggcggttggctacgctatggcattcctgaatatcgcctacctaaa
gacattctagacaaagaaatcgaactgatgtgccgcaacggcatgcaagttgaaaccaac
aaaaagcttggtgttgatttcacgctgtctcaattgagtgaaggctacgatgctgtctgt
ttggcagtgggggcgtctcaagcggtagaaatgaagtatcctggtagcgagttggacggt
tgctacctcggtgttgattacctgaaagattacgttacagagcaaaactacgttacgggc
aaaaaagttgccgtgattggtggtggtaacactgcgatcgactgtgcgcgtacggcgcgt
cgtgcgggtgccgataccactttgatctatcgtcgaactcgcgacgaaatgccagccgaa
gactacgaaatcgtcgaagctgaacatgagggtgtgaagttccatttcttaacgaatccg
gcgcaaaacatcgcggatgaaaacggccgcgtgaaggcaattcgattagaacgaatggcg
ttaggtgagccagattcgtctggtcgtcgtagtccgaaaccaacgggtgagttctttact
gaagcatttgataccgtgattgcagcggtatcgcaaaagccggatctcagcttcttagaa
aacgatgagctctccattcctctaacgcgttggaacacatctgaatccgatgctcaaacc
atgcacacgggtacgggcaatatcttcagtatcggtgattttcgtcgtggtcctgcaaca
gcggttgaagcggtgggcgatgggcgagttgcggcaaaagcgattgatctgttcctcaat
ggcgatatggcggatatgccgaaacctgcgttcaactctcgtaaagagaaaaaactagcg
caggtagaccctcttcatttcgaaaatatccaaaaagttgctcgttcaatcatgccggag
ttgactccagcgcagcgtgagcagagttttgctgaagtggagctgggctttgataacgat
gaagccatgaaagaagcggcgcgctgcttagagtgtggttgccaggcgaataccgactgt
gccttgcgagattactccacggaatatcatgccgaacaacatttcgatgtttccgtggac
gtttcctctgctagcgtgattggtcatcaagattggctcgatttgcgagcgaaagatctt
cgtcacaaatacgaagtagaccgcagttctgagttcattgaatttgatgctaaccgctgc
atcagttgtggtcagtgtattcaagcatgccgtgagcaagcggtacatggtgtgttgagt
tttgtgtcggataaaaatggccgaccagctttacgaccagatgatcgtccacgattccgc
tccgatgaaaaaggcgcaagctgcagcggtttgacgctcatgggcgattcaaaatgcgtg
caatgtggggcgtgtgttcaggcatgtccaacgggcgcgatggtggacagccgtgaccgc
tctcaaggcagaaccgaacagctaaaagccgtcgataccatttgtacctactgcggtgtg
ggttgtaagttgaccatgtttgtcgatgagcgacaaaacaaaatccgctatgtaaaaggg
gcggattcgccagttaaccaaggtatgctgtgcgtgaaaggccgttttggttttgatttc
attagcagcgaagagcgtttaacgacaccactgattcgtaaagatggttggttgcagcca
gcaacttgggacgaagcgattcagctagtggcttcgaagctttcgaccatcaagcaagat
tttggtagcaacgcactggccggattctcttcagcgaaaaccactaacgaagataactac
gcgtttcaaaaattcatccgtcgtgaacttggtacgaacaacgttgatcactgcgcacgt
ttgtgtcacgcatcaagtgtgacagggcttgaagcatcgttggggagtggtgcgatgacc
aacgacattccaagcattaagcattccgatgtgatctttattatcggttctgacaccaca
tctgcgcacccgatcatcgcttcgcacatcaaacaggcgattcgtcatcacggggcgcgc
ttgattgtggcagacccgaaacgagtggacatggctgaacatgcagagctgtacttagcg
catcgaccgggtacggatgttatgttgctcaacggcgtgatgcagcaaatcatcaaaaat
ggttggtacgatcaagaatacatcgaagagcgcgtagacggctttgataccttgcttcaa
gaggtgatgtcgccagcgtacaacctcgacaaagttgagttagtgacgggcgtaaaagcg
gacgatattttcgcgatggcgcgaatgattggtacggcaaaacgcacggcggtgtattac
tcaatgggtattacccagcatacaacaggtcacgacaacgttcgttcgattgcaaacctg
caattgttgtgtggcaacatcggtattgagggtggtggtattaacccactgcgcggtcaa
tcaaacgtacaaggtgcgtgtgatatgggcgctttaccgaactgttatccgggatatcaa
aaagtgtataacccgattgttcgtcagaaattcgcgattgagtgggatgcgccgaactta
ccttctgagcaagggcttaccctaacggaaatcatcgatgcggcgtgcaaacgagaagtt
cgcgggatgtacatcatgggcgaaaacccagtactgagcgatccaaaccaagcacacgtg
attgaagggttggaagcactcgactttttggtcgtgcaagacatcttcctcaccgagacg
gcgcagtacgccgatgtggtattgccttcttgttcatttgcggaaaaatccggtcacttc
accaatactgagcgacgcgtgcagcgcgttaatgcggcagtgaaagcgccgggtgaggcg
aaagaagattggtggatcattcaagcgatcgcaaacgcgatgggcagcgattggcattac
cagtgcgtttctgaaatcactagcgagatcgcgcgtgtaacgccgcaatatgcagggttg
cgttgggacgcgatcacgccgaacggtgttcaatggccaagtaacaagaacaatccaaac
ggtactcgtattatgcaccaaacccaatttacccgagggaaagggcaaatggtgggcgtg
ccgttccgctatgcagctgagttgcctgatgaagagtatcctttggtgcttacaacaggg
cgtgtgctagaacagttccacaccggtacgatgacacgcaaaacgaaagggttggataac
cttgctgggccaagagcgatgatcagtgttgaagatgccgaagcaattggtatccataat
ggtcagcgcctaaaagtgtcgactcgtcgtggcagcatcgaaattgatgcgtttgtgacc
aagcgaatgcaaaaaggcgtcgtgtttattcctttccatttcgttgagtcgccagttaac
cgattgacgactacggcaacggacccgcatgcgaaaattcctgaattcaaagtcgcagcg
gtgaagattgaaatcagtgaaacggctgctcaaccagagcctgtcgaggaagcggtacac
tacgtctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (34)   
   Pfam (34)   
All databases (52)   

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