KEGG   Vibrio diabolicus: AL552_04630
Entry
AL552_04630       CDS       T05332                                 
Name
(GenBank) helix-turn-helix transcriptional regulator
  KO
K20918  LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vdb  Vibrio diabolicus
Pathway
vdb05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    AL552_04630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vdb03000]
    AL552_04630
Transcription factors [BR:vdb03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    AL552_04630
SSDB
Motif
Pfam: GerE VpsT-like_REC HTH_23 HTH_40 Sigma70_r4 Sigma70_r4_2 DUF2089
Other DBs
NCBI-ProteinID: AVF93110
UniProt: A0A2L2K9W2
Position
2:979606..980262
AA seq 218 aa
MRNIMEQYMEKPEVLMLTQQSLQSENFKEMLSKNIETKITIIDTKNPSYHELIPERYFLL
VDFSVEIPSETLVYLKDSNKVLGTIMLNLGYDLDTEELASWPHVKGIFGPGDSMDKVCQG
LKAIIKGDNWLSRRLLDQLVNYYRGKEANSIIEPAIEVELTRREIQVLKMLKEGGSNMEI
ADSLFISEHTIKSHLYNIFRKLEVKNRTQATSWARRNL
NT seq 657 nt   +upstreamnt  +downstreamnt
atgagaaacattatggaacagtatatggaaaagcctgaagtcctaatgctcactcaacaa
agtttacagagtgaaaactttaaggaaatgctttctaaaaatatagaaactaaaataacg
atcatagatactaaaaaccctagttatcacgaactcattccggaacgctactttttgctt
gttgatttttcagttgagattccatccgaaactttagtttatttaaaagatagtaataaa
gtgctaggaaccataatgcttaatttaggttatgacttagacacagaagaactcgcctca
tggccgcatgtaaagggtatattcggtccgggagactccatggacaaggtgtgtcagggg
ttaaaagcaataataaaaggagataattggctgtctcgaagattactggatcagctggtt
aattattatcgaggaaaagaagcgaatagcattattgagcctgctatcgaggtagagctt
actcggcgtgaaattcaagttttaaaaatgttgaaagaaggaggttcaaatatggaaatt
gctgattctttatttatcagtgagcatactattaaatcacatctatacaatatttttaga
aaattagaagtaaagaaccgtacgcaagcaacaagttgggctaggcgaaatctgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system