KEGG T05332: AL552

Vibrio diabolicus: AL552_12220

Entry

AL552_12220       CDS       T05332

Name

(GenBank) glutamate--tRNA ligase

K01885

glutamyl-tRNA synthetase [EC:6.1.1.17]

Organism

vdb Vibrio diabolicus

Pathway

vdb00860

Porphyrin metabolism

vdb00970

Aminoacyl-tRNA biosynthesis

vdb01100

Metabolic pathways

vdb01110

Biosynthesis of secondary metabolites

vdb01120

Microbial metabolism in diverse environments

vdb01240

Biosynthesis of cofactors

Module

vdb_M00121

Heme biosynthesis, plants and bacteria, glutamate => heme

Brite

KEGG Orthology (KO) [BR:vdb00001]
09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    AL552_12220
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AL552_12220
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vdb01007]
    AL552_12220
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vdb03016]
    AL552_12220
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vdb02048]
    AL552_12220
Enzymes [BR:vdb01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     AL552_12220
Amino acid related enzymes [BR:vdb01007]
Aminoacyl-tRNA synthetase
  Class I (A)
   AL552_12220
Transfer RNA biogenesis [BR:vdb03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    AL552_12220
Prokaryotic type
   Other AARSs
    AL552_12220
Prokaryotic defense system [BR:vdb02048]
Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    AL552_12220

SSDB

Motif

Pfam:

tRNA-synt_1c Anticodon_2

Other DBs

NCBI-ProteinID:

AVF94502

Position

1:675311..676738

AA seq 475 aa
MTVKTRFAPSPTGYLHVGGARTALYSWLYAKNQGGEFVLRIEDTDLERNSQEAVDAILEG
MEWLGLEWDEGPYYQTQRFDRYNEMVDKLLAEGKAYKCYASKELLDEIRAEQEANKEMPR
YDANHPKIKAANEAAKDGDPCVIRFRNPKEGSVVFDDQIRGRIEIRNDQMDDLIIRRTDG
SPTYNFCVVVDDWDMGITHVVRGEDHINNTPRQINIYEALGAPVPTFAHCAMILGDDGAK
LSKRHGAVSVMQYRDMGYLPAALNNYLVRLGWSHGDQEIFSQEEMINLFSLNAVSKSASA
FNTDKLQWLNNHYIKNSDPAYVAEHLQWHLDQQKLDVTNGPAITDVIKLVGERCNTLVEL
AEQIRYFYEDFSEFEAGAAKKHLRGVAKEPLELALAKAEALTEWTTANIKDGVIAAVCEE
LEIGMGKIGMPLRVAVTGGGQSPSVDAVMELVGKERCVARIKMALEFIAEREANA

NT seq 1428 nt +upstreamnt +downstreamnt
atgacggttaaaactcgttttgctcctagcccaactggctatctacacgttggtggtgcg
cgtactgcactttactcttggctatacgctaaaaaccaaggtggtgaattcgttctacgt
atcgaagatacagaccttgagcgtaactctcaggaagcggttgatgcaattcttgaaggc
atggaatggctaggcttggagtgggatgaaggtccttactaccaaactcaacgttttgat
cgttacaacgaaatggttgataagctgctggcagaaggcaaagcttacaaatgttacgcg
tctaaagagctgctagatgaaatccgtgcagagcaagaagcaaacaaagaaatgcctcgt
tatgatgcgaaccatccaaaaatcaaagcggcaaacgaagcggctaaagacggcgaccca
tgtgttatccgtttccgtaacccaaaagagggcagcgtagtatttgatgaccaaattcgt
ggtcgcatcgaaatccgcaacgaccaaatggatgacttaatcatccgtcgtactgacggt
tctccaacgtacaacttctgtgtagttgtggacgactgggacatgggtatcactcacgtt
gttcgtggtgaagaccacatcaacaacacgcctcgtcaaatcaacatctacgaagcacta
ggtgcgccagtaccaacgtttgcgcactgtgcaatgatcttaggtgatgacggtgcgaaa
ctgtcgaaacgtcacggcgctgtatcggtcatgcaataccgcgatatgggttacttgcct
gcagcactaaacaactacctagtgcgtctaggttggtctcatggggaccaagaaatcttc
tctcaagaagagatgatcaacctattcagcctaaatgcagtatctaagtcagcgtctgct
ttcaatactgacaaactgcaatggttgaacaaccattacatcaaaaactcagatcctgcg
tacgttgcagagcacctacaatggcacctagatcaacaaaaactagacgtaacgaatggt
cctgctatcactgacgtgatcaagctagtgggtgagcgttgcaacacgctggttgagtta
gctgagcaaatccgttacttctacgaagatttctctgagtttgaagcgggcgcagcgaag
aaacacttacgcggtgtggctaaagagcctctagagcttgctctagcgaaagctgaagca
ctgaccgagtggacaacagcaaacatcaaagatggcgttatcgcagcagtctgtgaagag
ctagaaattggcatgggcaaaatcggtatgccattacgtgttgctgtaacaggcggtggt
cagtctccttctgtcgatgcagtaatggaactggttggcaaagaacgttgtgttgctcgt
attaagatggcgcttgagttcattgctgagcgtgaagcaaacgcataa

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