KEGG   Vibrio diabolicus: AL552_22305
Entry
AL552_22305       CDS       T05332                                 
Name
(GenBank) MSHA biogenesis protein MshE
  KO
K12276  MSHA biogenesis protein MshE
Organism
vdb  Vibrio diabolicus
Pathway
vdb05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    AL552_22305
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vdb02044]
    AL552_22305
Secretion system [BR:vdb02044]
 Type II secretion system
  MSHA pilus biogenesis protein
   AL552_22305
SSDB
Motif
Pfam: T2SSE MshEN AAA_16 AAA_22 AAA_11 DUF4388 AAA_30 AAA_29 AAA_19 AAA_18 ATPase_2 AAA_23 Rad17 nSTAND3 NTPase_1 DUF2949 AAA_7 ResIII ABC_tran SRP54 cobW DEAD Zeta_toxin
Other DBs
NCBI-ProteinID: AVF96237
Position
1:complement(2668356..2670080)
AA seq 574 aa
MKIQLRKRLGDLLVEEGIVSEEQIQQALNAQRSTGQKLGDALIDLGFITEKQMLDFLSQQ
LGLPLIDLGRAPVDAEAVQILPEVHARRLRAMVVARNGDTLRVAMSDPADLFIQESLMNL
LGEYNLEFIVASERQLISSFDRYYRRTKEIASFAEQLHEEHKDEQSFDYGIDGTDSEEVT
VVKLVNSMFEDAVQVGASDIHIEPDDQILRLRQRIDGVLHETILNEVNIASALVLRLKLM
AHLDISEKRLPQDGRFNIKVRGQSIDIRMSTLPTQYGESVVMRLLNQSAGLRPLEESGLP
PDLLARLRRQLARPHGMILVTGPTGSGKTTTLYGALSELNEPGKKIITAEDPVEYRLPRI
TQVQVNSKIDLTFSRVLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTND
AVDSALRMIDIGAPGYLVASAVRAVVAQRLVRRVCPDCKTEDHLDESRQQWLAGRFPNQV
GTTFYKGAGCQNCNLTGYRGRIGVFEMLELEQEMMDKLRANDAVGFAQAARRSENYKPLL
ASAMELALQGTVSLDEVMTLGEGDASGKTDPIFI
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgaaaattcagttgagaaaacgcttaggcgatcttctggttgaagaaggcatcgtctct
gaagaacaaatccagcaagcactaaacgcacaacgtagtaccgggcagaagctaggcgat
gcgttaattgatctcggctttattactgagaagcaaatgttggacttcttgtcccaacaa
cttggtttgccattgatcgatcttggtcgtgcccctgtggatgcggaagcggtacagatt
ctacctgaggtacacgcacgtcgcttacgtgcgatggtcgttgctcgaaatggggacacg
ttgcgcgttgccatgagtgaccctgcggatttgttcatccaagagtcactgatgaatttg
ctaggtgaatacaaccttgagttcatcgtggcttcagagcgccaactcatttcaagcttt
gaccgctattatcgccgcaccaaagaaatcgcttctttcgcggaacagttgcatgaagag
cataaagatgagcaaagcttcgattacggtattgatggaaccgacagtgaggaagttacc
gttgtaaagctggttaattccatgtttgaagatgcggtacaagtcggggcatcggatatt
catattgagccagacgatcagattttgcgcttacgtcagcgtattgatggtgtactgcat
gaaaccatcctgaatgaagtgaatatcgcatcggctttggttcttcgattgaagttgatg
gcgcacttagacatctctgagaagcgcttgccacaagatggccgattcaatatcaaagtg
cgtggtcaatcaatcgatattcgtatgtcgacgctaccaacgcaatacggggagtccgtg
gtaatgcgtctgcttaaccagtctgctggtttgcgtccattagaagagtcaggtttgccg
ccagatttgcttgctcgtttacgtcgacagttggctcgtccgcacggcatgatcttggtg
acggggccgacaggttcaggtaaaaccaccacgctttacggcgcattaagtgagctcaac
gaacctgggaaaaagatcattacagcagaggacccggttgaatatcgcctgcctcgtatc
actcaggtacaggtaaacagtaagatcgatctgactttctcgcgtgtgcttcgaaccttc
ttgcgtcaagacccagacatcattcttgttggtgagatgcgtgaccaagagacggtagaa
attggtctgcgagctgcactaacgggtcacttagtattgagcactcttcacactaacgac
gcggttgacagtgccttacgcatgatcgatataggcgcaccgggttacttggttgccagt
gcggtcagagcagtggtggcgcagcgtcttgttcgccgtgtttgtccagattgcaaaaca
gaagaccatctagatgagtcacgccaacagtggttagctgggcgttttccaaaccaagtg
ggcaccactttttataaaggtgcaggctgtcaaaactgtaacttgactggctatcgaggc
cgaattggtgtgtttgaaatgctcgaacttgagcaagaaatgatggataaattgcgcgcc
aatgatgcggttggctttgcccaagccgcgcgtcgctcagaaaactataagccactgctt
gcttctgcaatggaactggcgctacaaggcaccgtcagtttggatgaagtgatgacccta
ggtgagggtgacgcttctggtaagactgatcccattttcatatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (30)   

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