KEGG   Vibrio diabolicus: AL552_23015
Entry
AL552_23015       CDS       T05332                                 
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
  KO
K06949  ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
Organism
vdb  Vibrio diabolicus
Pathway
vdb00730  Thiamine metabolism
vdb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    AL552_23015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vdb03009]
    AL552_23015
Enzymes [BR:vdb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     AL552_23015
Ribosome biogenesis [BR:vdb03009]
 Prokaryotic type
  GTPases
   AL552_23015
SSDB
Motif
Pfam: RsgA_GTPase MMR_HSR1 nSTAND1 GTP_EFTU ABC_tran AAA_16 cobW AAA_29 RNA_helicase AAA_22 Roc AAA_7 AAA_23 IIGP AAA DUF6371 SMC_N
Other DBs
NCBI-ProteinID: AVF96349
Position
1:2809217..2810281
AA seq 354 aa
MAKKKKLTKGQVRRVRSNQQKRLKKQEESIQWDENMLGASKQGLVITRFGQHADIEDLET
GEIQRCNLRRGIESLVSGDRVLWREGLESMAGISGVVEAVEPRSSVLTRPDYYDGLKPVA
ANIDQMVIVSSVLPELSLNIIDRYLVASETLNIAPLLVLNKVDLLEADDRAMYEEWLKEY
ERIGYKVLLVSKKSGEGIAELETLLRDRINIFVGQSGVGKSSLVNALMPELESEVEEGEV
SENSGLGQHTTTAARLYHIPTGGDLIDSPGVREFGLWHLEAEEVTKAFVEFRPYLGGCKF
RDCKHNDDPGCLLREAVEKGEINETRFENYHRILESMVENKANRQYSRNKKADL
NT seq 1065 nt   +upstreamnt  +downstreamnt
gtggcaaagaagaaaaagttaaccaaaggtcaagtgcgacgcgtacgcagcaaccaacaa
aagcgtttaaaaaagcaagaagagtccatccagtgggatgaaaacatgctaggcgcaagc
aaacaaggtctagtgatcactcgttttggccagcacgcggatattgaagaccttgaaaca
ggcgagattcaacgctgtaaccttcgccgtggtatcgaatctttagtatctggcgatcga
gttttatggcgcgaaggcttggagtctatggctggcatttctggcgttgttgaagcggta
gaacctcgttcttcagtgctcactcgtccagattactacgatggcctaaagcccgtagct
gccaatattgatcaaatggtcattgtctcctcggtactgcccgagctatcactgaatatt
attgaccgttatctcgtagcatcagaaacactgaatatcgcaccattgctggtcttaaac
aaagtcgatcttctagaagccgatgatcgtgcaatgtatgaagaatggctcaaagaatat
gaacgcattggctataaagtgcttctggtcagcaagaaatctggagaaggcattgctgaa
ctagaaaccctgctgcgtgaccgcattaatatctttgttggtcaatcaggcgtgggaaaa
tccagcttagtcaatgcgttaatgccagagctagagagcgaagtggaagaaggcgaagtt
tccgagaactctggtttaggccaacacaccacgacagcagcgcgcttgtatcatattccg
acgggtggcgacttgatcgactcgcctggagtgcgtgaatttgggctttggcatttggaa
gcagaagaagtaacgaaagcattcgttgaattccgaccatacttaggcggttgtaagttc
cgagattgtaagcacaatgacgaccctggctgccttctacgtgaagctgttgagaaaggg
gaaatcaacgaaactcgctttgaaaactaccatcgcattttggaaagcatggttgaaaac
aaagcaaaccgtcagtattcacgcaataagaaagccgatctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (34)   

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