KEGG   Vibrio diabolicus: AL552_24195
Entry
AL552_24195       CDS       T05332                                 
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
vdb  Vibrio diabolicus
Pathway
vdb00730  Thiamine metabolism
vdb01100  Metabolic pathways
vdb01240  Biosynthesis of cofactors
Module
vdb_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    AL552_24195
Enzymes [BR:vdb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     AL552_24195
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated PepSY
Other DBs
NCBI-ProteinID: AVF96536
Position
1:complement(3053336..3055276)
AA seq 646 aa
MSSRKQARLEAKQFIETLSVQPYPNSTKVYVEGSRPDVRVPMREIALADSLIGGTKEAPI
FEPNEAVRVYDTSGVYTDPNYDIDLYSGLPKLRESWIEERGDTELLDEVSSVYTKERLED
ETLDDLRYGNLPRIRRAKDGQCVTQLHYARKGIITPEMEFIALRENMGRAKYRDDVLNQQ
HPGQSFGANLPKDITAEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VTSSIEEEVEKLVWATRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSVADANDEAQFAELRTLGELTKIAW
EYDVQVIIEGPGHVPMHMIKENMEEQLEHCHEAPFYTLGPLTTDVAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKVGMITYKLAAHAADLAKGHPGAQVRDNALSKAR
FEFRWEDQFNLSLDPETARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYVKDT
EQVAADQAISIKMLDDPLEGMRQKSQEFRDTGSELYHPAAHAEVSD
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgtcgagtcgcaaacaagcgagactggaagcaaaacagtttattgaaacactctcggta
cagccgtacccaaattccacaaaagtatatgtagaaggttcacgtccagatgttcgtgta
cctatgcgtgaaatagcgctagcagatagtctgattggtggcacaaaagaagcgcctatt
ttcgagccgaatgaagccgtccgagtctacgatacgtcaggtgtttatactgatccgaac
tacgatattgacctttatagcggcttaccaaagctaagagaaagctggattgaagagcgt
ggtgacacagagttactcgatgaagtaagctcggtgtacaccaaagaacgcttagaagac
gaaacactagacgatcttcgttacggtaatctaccacgtattcgacgtgccaaagatggg
caatgcgtcactcaactgcactatgctcgcaaaggtattatcaccccagaaatggaattc
atcgcgctgcgtgaaaacatgggtcgtgccaagtaccgtgatgatgtgctgaatcaacag
catcctggtcaaagctttggagctaatcttccaaaagacattaccgccgagtttgttcgc
aaagaagttgccgaaggtcgcgcgattatcccttctaatatcaaccacccagaatccgaa
ccaatgatcattggacgtaactttttggtcaaagtgaacgccaatatcggtaactcatcg
gtgacgtcttcgattgaggaagaagttgagaagctcgtttgggcgacacgctggggtggg
gataccgttatggatctctctactggacgtaacatccacgaaactcgcgagtggattctg
cgtaacagcccggttccgatcggtaccgtacctatgtaccaagcgcttgagaaagtgaat
ggagttgccgaaaatcttaactgggaagtgatgcgcgatactctgattgagcaagcagag
cagggcgttgattacttcactatccatgccggtttattactgcgttatgtaccaatgacg
gctaaacgtgttactggcatcgtttctcgtggtggttctatcatcgcgaaatggtgttta
gcgcatcaccaagaaagcttcttatatacccacttccgagagatctgtgaaatctgtgct
aagtatgatgtcgcactatctcttggtgatggtctgcgtcctggctcggttgccgatgct
aacgatgaagcgcagtttgctgagcttcgtacccttggtgagttaaccaagattgcgtgg
gaatacgacgtacaggtcattatcgaaggtcctggtcatgttccaatgcacatgatcaaa
gagaacatggaagagcagctagagcactgccatgaggctccgttctacacccttggtcca
ctgacgacagacgtcgctcctggttacgaccatattacgtcaggaattggcgctgccatg
attggctggtatggctgtgcgatgctttgttacgtaacacctaaagagcatcttggctta
ccaaacaaagaagacgtgaaggtaggcatgatcacttacaagcttgctgctcacgctgct
gatttggcgaaagggcatccaggcgcacaagttcgtgataacgcgctttctaaagcacgt
tttgaattccgttgggaagaccaattcaacttgtcactcgacccagaaaccgctcgcgct
ttccatgatgaaaccttgcctcaagagtctggcaaagttgctcacttctgttcgatgtgc
ggaccaaagttctgctcgatgaagatttcgcaagaggtacgagagtacgtgaaagacact
gagcaagttgctgcggaccaagctatctctatcaaaatgcttgatgatcctcttgagggg
atgcgtcagaaatctcaagaatttagagacacaggttctgagttataccacccagcagca
catgccgaggtaagtgattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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