KEGG   Veillonella dispar: NCTC11831_00987
Entry
NCTC11831_00987   CDS       T05848                                 
Symbol
polC_2
Name
(GenBank) DNA polymerase III polC-type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
vdn  Veillonella dispar
Pathway
vdn03030  DNA replication
vdn03430  Mismatch repair
vdn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC11831_00987 (polC_2)
   03430 Mismatch repair
    NCTC11831_00987 (polC_2)
   03440 Homologous recombination
    NCTC11831_00987 (polC_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vdn03032]
    NCTC11831_00987 (polC_2)
   03400 DNA repair and recombination proteins [BR:vdn03400]
    NCTC11831_00987 (polC_2)
Enzymes [BR:vdn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCTC11831_00987 (polC_2)
DNA replication proteins [BR:vdn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NCTC11831_00987 (polC_2)
DNA repair and recombination proteins [BR:vdn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NCTC11831_00987 (polC_2)
SSDB
Motif
Pfam: DNA_pol3_alpha PHP DNA_pol3_finger HHH_6 DUF655 HHH_3 YhfH
Other DBs
NCBI-ProteinID: VEG93553
Position
1:1049257..1053048
AA seq 1263 aa
MKVRYRVVPKQNKKSSFYVNCHSQHVTIQAADSAFSTLLGLRERLSAWYKEKNISFDDIP
TNTDTACCFAWKVDTETGEGLDTYYYGGGCGAGEWIEAAEAQREAEEAKNKVPRGKSFAG
YDQQDEYDDVDEDDFAPFVEAVELGYFNNSPVVVSRSNQTAAASSGSDTVASVSSTPKAS
KGFAPKSTIKSTGKGSEGDSKYPRRAPKDAPTDEGMILGPKIEGVTSKIMGTLDTPSVIF
EGVFVGLDKRDTKTGKSIVNGSIVDDTNSIKFIKFTNSPEEGDALLKQLKGLQRVRVQGS
VSFDDRFDKDYILSIRSIEAMETNSVERTENRPDSRVELHLHTKMSDKDALVSVKDLFKT
VKKWGHPAVAITDHGVVQAFPEAQALGKELGVKVIYGVEGYLIDDEIVARDEELVVDKKK
KKEKDKRYHIILLAKNMVGLRNLYKMISISHLEHYKVRPRLPRSVIEEHREGIIIGSACE
AGELMQSIVRGATKEELLEIASFYDYLEIQPHTNNMFLVRKGLMPDEQALIDMNKTVIEL
GEALNKPVCATCDVHYLTPEEKIYREIMLTACGYPDADEQPDLHLRTTDEMLASFPYLSE
EKAYEVVVTNTRAINDSIEDIKPVPDGTYSPKIEGADEAFTEMCYRNAKAIYGDPLPRVV
QERLDYELDCIISNGYGVLYYIAHKLVKKSLDDGYLVGSRGSVGSSFAATMSEITEVNPL
PPHYVCPNCKHSEFFEKGEYAGGFDLPRKDCPECGHALQTNGHDIPFAIFLGFEGDKVPD
IDLNFSGDYQAKAHKYTEELFGRDNVFKAGTIGTIADKTAFGYVKKYAEIRDIQARSGFF
EHLAKGFTNVKNTTGQHPGGIMVCPRDMDVHHFTPIQHPANKKESGVLTTHFDYHSIEGR
MTKLDILGHDDPTIIRMLEDLTGIDAKTIPFDDPKTLSLFSSTEGIGLTPEQLQGDQVAS
LAVPECGTKFVRGMLEDSRPQTFSDLVRISGFSHGTNVWLDNAQDLIKNGTCKLNEAIST
RDDVMNFLIHRGMDRKHSFFVMENVRKGKGIEKRNKQGQATTEFEAEMRENNIPEWFIES
CKKISYLFPRAHAVAYVMMAFRIAWFKVYHPLAFYAAYFSIRAKAFDLRIMTGDLKTQMT
EFNRIKALDRAASPKDKDLMSALEVSMEMYQRGYRFVNVDIQHSEARRFSIKDGALLPPF
LAIDSLGETVADAIVAEREERPFTSLKDLQRRCKVSNTIIDLMKELKCCGELPEDEQMSL
FGA
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgaaagtacgttatcgtgttgtaccaaaacagaataagaaatcatccttctatgtaaac
tgtcatagccaacatgtgacgattcaagcggcggactcggccttttccacattacttggt
ttgcgtgaaagattgtctgcatggtataaggaaaaaaatatctcttttgacgatattcca
actaataccgatacagcttgttgtttcgcatggaaagtagatactgaaactggagaaggt
ttagatacctattattatggtggtggctgtggtgctggtgaatggatagaagcggcagaa
gcgcaacgtgaggctgaagaggctaaaaacaaagtgcctagaggtaagtcttttgctggt
tatgatcaacaagatgaatatgatgatgttgacgaagatgattttgctccatttgtagag
gctgttgagttaggctatttcaacaatagtccagttgttgtgtctcgttctaatcaaacg
gctgccgcatctagcggtagtgatactgtcgcatctgtgagcagtacacctaaagcaagc
aaaggttttgcacctaaaagtactataaaatctactggaaaaggtagtgaaggggatagc
aaatatcctcgtcgtgcaccgaaggatgctcctactgatgaaggcatgattttaggacct
aaaattgagggagttacctctaaaattatgggcactttggatacgcctagtgttattttt
gaaggtgtatttgttggtctagataaacgtgatactaagactggtaaaagtatcgttaac
ggtagcatcgtagacgatacgaatagtatcaaatttatcaagtttacgaacagccctgaa
gaaggggatgcgctacttaaacaattgaaaggtttacaacgtgtacgcgtacaaggtagc
gtcagctttgatgatcgatttgataaggattatatcttatctattcgaagcattgaagct
atggaaactaatagcgtggagcgcactgaaaaccgtccagactcccgtgtagagctgcac
ttacatactaagatgagtgataaggatgcccttgtatctgttaaagacctatttaaaaca
gtaaaaaaatggggtcatcctgcggtggctattacagatcacggcgttgtacaagccttt
ccagaagctcaagctcttggtaaagagttgggcgttaaggttatctacggtgtagaaggc
tatctcattgatgatgaaattgttgctcgtgatgaagagcttgtagtagataagaagaag
aaaaaagaaaaagataaacgttaccatattatcttattagctaaaaatatggtaggtttg
cgcaatctgtacaagatgatatctatttctcaccttgaacactataaggtacgtcctcgt
ttgcctcgttctgttattgaagaacatcgtgaaggcattattatcggctctgcttgtgaa
gctggtgaacttatgcaatccattgttcgcggcgctacaaaggaagaactattagagatt
gcatctttctatgactatcttgaaattcagccacatacaaataatatgttcttggttcgt
aaagggcttatgccagatgagcaagctcttatcgatatgaataaaacagttatcgaatta
ggggaagctttaaataaaccagtatgtgctacttgtgacgttcattatttaacaccagaa
gaaaaaatctaccgtgaaatcatgttaacggcatgtggttatccagatgcagatgaacaa
ccagatttacatttacgtaccaccgatgaaatgttggcatccttcccttacttaagtgaa
gaaaaggcctatgaagtagttgttactaatactcgtgcaattaacgatagcattgaagat
attaaaccagttccagatggcacatattctccaaagattgaaggtgccgatgaagctttc
acagaaatgtgttatagaaatgcgaaagccatttatggtgacccattgcctcgcgtagta
caagagcgacttgattatgaactagactgtattatctccaatggttacggcgtattgtat
tacattgctcataagctagtaaaaaaatcacttgatgatgggtatctcgtaggttctcgt
ggttctgtaggttcttcctttgcagcaaccatgtctgaaattacagaagtaaatccatta
ccgccacattatgtatgtcctaattgtaagcattctgaattctttgaaaagggcgaatac
gcaggtggttttgatttaccacgtaaagattgtccagagtgtggtcatgcgctacaaaca
aatggccatgatattccgtttgccatcttccttggttttgaaggtgataaggttccagat
attgacctaaacttctctggtgactaccaagcaaaggcacacaagtatacggaagaatta
tttggacgcgacaatgtatttaaagcgggtaccatcggtactattgcggacaaaacagca
tttggttatgttaaaaaatacgccgaaattcgagatattcaagctcgtagtggtttcttt
gaacatttggcaaaaggctttaccaatgtaaagaatacaacaggccaacatcctggcggt
attatggtatgtccgcgtgacatggatgtgcatcactttacacctattcagcatcctgcg
aataagaaggaaagtggcgtattaacgacacactttgactatcactctatcgaaggtcgt
atgactaagcttgatattctaggtcatgatgatccgaccatcattcgtatgctagaggat
ttgacgggtattgatgctaagacaattccatttgatgatccaaagacgttgagcttattc
tcttctacagaggggattgggttaacacctgagcaattacaaggtgaccaagtagctagc
ttggctgtaccagaatgtggtacgaagttcgtacggggcatgcttgaagattctcgtcct
caaacattctctgacttggttcgtatctctggattctctcatggtacaaacgtatggctc
gacaatgctcaagatctcattaaaaatggtacttgtaaattgaatgaagctatttctacc
cgtgatgacgtaatgaacttcttgattcatcgcggtatggatagaaagcatagtttcttc
gtaatggaaaatgtgcgtaaagggaagggcattgaaaaacggaataaacaaggtcaagct
acgacggaatttgaagcagaaatgcgagaaaataatattcctgaatggtttattgaatct
tgtaaaaagatttcctatctattccctcgggcccatgcggtagcctatgtaatgatggca
ttccgcattgcctggtttaaggtataccatccattggcattctatgcagcatatttctcc
attcgagcgaaggcctttgacttacgcattatgacgggtgaccttaaaacgcaaatgact
gagttcaatcgtattaaggctcttgatcgcgctgccagtcctaaagataaggaccttatg
agcgctttagaagtatctatggaaatgtaccaacggggctatcgttttgttaatgtagat
attcaacactccgaagctagacgctttagcattaaagatggtgctttattgccgccattc
ttagctatagactccttaggtgaaacagtagctgatgctattgtagctgaacgagaagaa
cgtccctttacatccctaaaagacttgcaacgtcgttgtaaggtatctaataccatcatt
gatcttatgaaagaacttaaatgctgtggtgaactacctgaagacgaacaaatgtcactc
tttggggcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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