KEGG   Verminephrobacter eiseniae: Veis_2264
Entry
Veis_2264         CDS       T00460                                 
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
vei  Verminephrobacter eiseniae
Pathway
vei03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vei00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Veis_2264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vei03021]
    Veis_2264
   03400 DNA repair and recombination proteins [BR:vei03400]
    Veis_2264
Enzymes [BR:vei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Veis_2264
Transcription machinery [BR:vei03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Veis_2264
DNA repair and recombination proteins [BR:vei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Veis_2264
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 DUF5887
Other DBs
NCBI-ProteinID: ABM58012
UniProt: A1WK55
Position
2563115..2567227
AA seq 1370 aa
MAYSFTERKRIRKSFGTRDSVLEVPYLLQMQKDAYTAFLQADKEPRKRTIEGLQAAFDAA
FPIVSHNGFVEMKFIEYNLARPAFDVRECQTRGLTFASAVRAKVQLIIYDRESSTSQSKV
VKEVKEQEVYMGEVPLMTDKGSFIINGTERVIVSQLHRSPGVFFEHDKGKTHGSGKLLFS
ARIIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLNPESILANFFVNDNFRLM
DSGAQMEFVPERLRGEVARFDITDKSGKLIVAKDKRVTARHTRDLEQSGSTHISVPEDFL
VGRVVARTIVDADSGEILAKANDELTEALLKKLRSAAVRELQCIYTNELDQGAYISHTLR
SDETVDEFAARVAIYRMMRPGEPPTEDAVQALFQRLFYNPDTYDLSRVGRMKFNARIGRD
ESTGPMVLSNEDILAVVKILVDLRNGNGEVDDIDHLGNRRVRCVGELAENQYRTGLARIE
KAVKERLGQAEQEPLMPHDLINSKPISAALKEFFGASQLSQFMDQTNPLAEITHKRRVSA
LGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFIETPYR
RVVGGMVTNDIDYLSAIEEGKYVIAQANAVLDKEGRLTGDLVSAREKGESILCAADRVRY
MDVSPAQIVSVAASLVPFLEHDDANRALMGANMSRQAVPVLRPEKPLVGTGIERVAAIDS
GTVVTATRGGSVDYVDATRIVVRVNDDETVAGEVGVDIYNLIKYQRSNQNTNIHQRPIVK
KGDRLVKGDVIADGASTDLGEIAIGQNMLIAFMPWNGYNFEDSILISERVVSEDRYTSIH
IEELVVMARDTKLGAEEITRDIPNLSEQQLNRLDESGIIYVGAEVQPGDTLVGKVTPKGE
TTLTPEEKLLRAIFGEKASDVKDTSLRVEQGSQGTVIDVQVFTREGIARDKRAQQIIDDE
LKRFRLDLNDQLRIVEADAFERIEKLLLGRVANGGPHKLLKGAKIDKPYLSSVEKFHWFD
IRPAQDEVAAQLELIKDALEQTRHSFDLAFEEKKKKLTQGDELPAGVLKMVKVYLAVKRR
LQPGDKMAGRHGNKGVVSKIVPVEDMPYMADGTPADIVLNPLGVPSRMNIGQVLEVHLGW
ASKGIGQRIGDMLQQQAKAAELRKFLDKVYNARGRTEDLAQLCDEELVAMAAHLRHGMPY
ATPVFDGASEEEIKDMLKIAYPDEIAQRKGLTATRTQAFLYDGRTGERFERPTTIGYMHY
LKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYVLQEMLT
VKSDDVAGRTKVYESIVKGEHAIEAGMPESFNVLVKEIRSLGLDIELERS
NT seq 4113 nt   +upstreamnt  +downstreamnt
atggcctattcctttaccgagcgcaagcgaatccgcaaaagtttcggcacccgcgacagc
gtgctcgaagttccttatttgctgcaaatgcaaaaggacgcctataccgccttcctgcaa
gcggacaaggagccccgcaaaagaaccatcgagggtctgcaggcggcattcgatgccgcc
tttccgatcgtctcgcacaacggtttcgtcgagatgaagttcatcgagtacaacctggcc
aggccggcattcgatgtgcgcgagtgccagacgcgcggcctgacctttgcgtcggccgtg
cgggccaaggtgcagttgatcatctatgaccgcgagtcctcgacctcgcagtccaaggtg
gtcaaggaagtcaaggagcaagaggtctacatgggcgaagtgccgctgatgaccgacaag
ggctcgttcatcatcaacggcaccgagcgcgtgatcgtctcgcagttgcaccgctcgccg
ggtgtgttcttcgagcatgacaagggcaagacccatggctcgggcaagctgctgttttcc
gcgcgcatcattccttaccgtggctcttggctcgacttcgagttcgaccccaaggacatc
ctgtactttcgcgtcgaccgccggcgcaagatgccggtgacgatcttgctcaaggccatc
ggcctgaacccggaatcgatcctggcgaacttcttcgtcaacgacaatttccggctgatg
gacagcggcgcgcaaatggaattcgtccccgagcggctgcgcggcgaagtggcccgtttc
gacatcaccgacaagtccggcaagctcatcgttgccaaggacaagcgcgtgactgcgcgc
cacacccgcgatctggagcagtccggcagcacgcatatcagcgtgcccgaggatttcctg
gtcggccgggtcgtggcgcgcaccatcgtcgatgccgacagcggcgaaatcctggccaag
gccaatgacgagttgaccgaagccctgctcaagaagctgcgcagcgccgccgtgcgggag
ttgcagtgcatctacaccaacgaactcgaccagggcgcttacatctcgcacaccctgcgc
agcgacgaaacggtggacgagtttgccgcccgcgtggccatctaccgcatgatgcgccct
ggcgagccgcccaccgaggacgcggtgcaggccctgttccagcgcctgttctacaacccc
gatacctacgatttgtcgcgtgtcggccggatgaagttcaacgcccggatcgggcgcgac
gagtccaccggcccgatggtgctgtccaatgaggacatcctggccgtggtcaagattttg
gtcgacctgcgcaacggcaatggcgaagtcgatgacatcgatcacctgggcaaccgccgc
gtgcgctgcgtcggcgagttggcggaaaaccagtaccgcaccggcctggcgcgtatcgag
aaagccgtcaaggagcgtctgggccaggccgagcaagagccgctgatgccgcatgacctg
atcaactccaagccgatttcggcggccctgaaggagtttttcggcgcttcgcagttgtcg
cagttcatggaccagaccaacccgctggcagagatcacgcacaagcgccgcgtctccgcg
ctgggcccgggggggttgacccgcgagcgcgcaggttttgaagtgcgcgacgtgcatgtg
acccactatggccgcgtgtgcccgatcgaaacccccgaaggcccgaacatcggtttgatc
aactcgctggcactgtacgcgcgcctgaacgagtacggcttcatcgaaaccccgtaccgc
cgggtggtcggcggcatggtcaccaacgacatcgactacctgtcggcgatcgaagaaggc
aagtacgtgatcgcgcaggccaacgccgtgctcgacaaggaggggcgcctgacgggcgac
ttggtctcggcccgtgaaaaaggcgagtcgatcctgtgcgccgccgaccgggtgcggtac
atggatgtctcgcctgcgcagatcgtgtcggtggccgcttcgctggtgccgttcctggag
cacgacgatgccaaccgcgccttgatgggcgccaacatgtcgcgccaggccgtgccggtg
ctgcgcccggaaaagccgctggtcggaaccggcatcgagcgcgtggcggccatcgactcg
ggcaccgtggtcacggcaacacgcggcggcagcgtggactatgtcgatgccacccgcatc
gtggtgcgcgtcaatgacgacgaaacggtggctggcgaagtcggggtggacatctacaac
ctgatcaagtaccagcgctccaaccagaacaccaacatccaccagcgccccatcgtcaaa
aagggcgaccggctggtcaagggcgatgtgatcgccgatggcgcatcgacggacctgggc
gaaatcgccattggccagaacatgctgatcgcgttcatgccctggaacggctacaacttc
gaggactcgatcctgatctcggaacgggtggtgtccgaagaccgctacacctcgatccac
atcgaggaactggtggtgatggcccgcgataccaagctcggcgccgaagaaatcacgcgc
gatatcccgaacctgtcggagcagcaactgaaccgcctcgacgagtccggcatcatctac
gtgggcgccgaagtgcagcccggcgatacgctggtgggcaaggtcacgcccaagggcgag
accaccctcacacccgaagaaaagctgctgcgcgcgatcttcggcgagaaggcttccgat
gtgaaggacacctcgctgcgcgtcgagcaaggctcgcaaggcacggtgatcgacgtgcag
gtgttcacccgtgaaggaatagcgcgcgacaagcgcgcgcagcagatcatcgacgatgag
ctcaagcgctttcggctggacttgaacgatcaactgcgcatcgtcgaggccgacgccttc
gagcgcatcgaaaagctgctgctcgggcgcgtggccaatggcggtccgcacaaactgctc
aagggcgcgaaaatcgacaagccctatctgtcgtcggtggagaaattccattggttcgac
atccgcccggcgcaggacgaggtcgccgcgcagctcgaattgatcaaggatgcgctggag
cagacgcgccacagcttcgacctggctttcgaggaaaaaaagaaaaaactcacgcaaggc
gatgagttgcccgccggcgtgctgaagatggtcaaggtctacctggccgtcaagcgccgc
ctgcaacctggcgacaagatggccgggcgccatggcaacaagggggtggtctcgaagatc
gttccggtcgaagacatgccttacatggccgacggcacgcctgccgacatcgtgctcaac
ccgctgggcgtgccttcgcggatgaacatcggccaggtgctggaagtgcacctgggctgg
gccagcaagggcataggccagcgcatcggcgacatgttgcagcagcaggccaaggccgca
gaactgcgcaagtttctggacaaggtgtacaacgcgcgcggccgcaccgaggacctggcg
caactgtgcgacgaggaactcgtggccatggcggcccatctcaggcatggcatgccgtat
gccaccccggtgttcgacggtgcttcggaagaagaaatcaaggacatgctcaaaatcgct
tacccggacgagatcgcgcagcgcaagggtctgaccgccacccgcacccaagccttcctg
tacgacggccgcaccggcgagcgcttcgagcggcccacgaccataggctacatgcactac
ctgaagctgcaccacttggtcgatgacaagatgcacgcccgttccaccggcccctactcg
ctggtcacgcagcaaccgctgggcggcaaggcccagttcggcggccagcgcttcggcgag
atggaagtctgggcgctcgaagcctacggcgccgcctacgtgctgcaggaaatgctcacc
gtcaagtccgacgatgtggccggccgcaccaaggtgtacgagtcgatcgtcaagggcgaa
catgccatcgaagccggcatgccggaatcgttcaacgtgttggtcaaggaaatccgttca
ctgggcctggacatcgagctcgaacgctcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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