KEGG   Verminephrobacter eiseniae: Veis_3067
Entry
Veis_3067         CDS       T00460                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
vei  Verminephrobacter eiseniae
Brite
KEGG Orthology (KO) [BR:vei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vei03009]
    Veis_3067
Enzymes [BR:vei01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Veis_3067
Ribosome biogenesis [BR:vei03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Veis_3067
SSDB
Motif
Pfam: tRNA_U5-meth_tr Met_10 RrnaAD Methyltransf_25 Methyltransf_31 Methyltransf_23
Other DBs
NCBI-ProteinID: ABM58800
UniProt: A1WME3
Position
3417939..3419399
AA seq 486 aa
MSEPKEPSPALACAAQDGSGLPEGWLQVQSMDLDAQGVARRADGKVVFIDGALPSEWVSA
STYRKKNHWEQANLTAIHRESAQRVRPGCPHFGLHAGACGGCKMQHLHMGGQVAVKQRVL
EDNLWHLGRVKPAMVLRPIEGPAWGYRYRARLSVRHVIKKGVVLVGFHERKSRYVADMAQ
CPVLPPHAAALLMPLRSLIAALDAHDSCPQIELACGDSVTALVLRHLQPLSVGDHARLRA
FAAEHGVQWWLQPRGPDTVQPLDEGGEQLSYALPDFGITMPFKPTDFTQVNPHINRVLVA
RALRLLAVRPDERVIDWFCGLGNFTLPLATQARAVLGVEGNAALVARARANHGLNQALAQ
NHRVLAATDFVACNLFAMTPGMLLGHGAADKWLVDPPREGALALVKALADIEQSRRGAQG
ATALPAGAEDWVPPRRIVYVSCNPATLARDAALLVHLAGYQCAAAGMVNMFPHTAHVESI
AVFERG
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgagcgaaccgaaagaaccatcccccgcattggcgtgcgccgcacaggatggcagcggc
ctgcccgaaggctggctgcaggtgcagtcgatggacctcgatgcccagggcgtggcccgc
agggccgacggcaaggtggtgttcatcgacggtgcgctaccgtcggaatgggtcagcgcc
agcacctaccgaaagaaaaaccactgggagcaggccaacctgacggcgatccaccgcgaa
tccgcgcagcgcgtgcgccctggctgcccgcattttggcctgcatgccggcgcttgcggc
ggctgcaagatgcagcatctgcatatgggggggcaggtggcggtcaagcagcgggtgctg
gaagacaacctctggcacctgggccgggtcaagcccgccatggtgctgcgccccatcgag
ggcccggcctggggctaccgctaccgggcccgcctgtccgtgcgccatgtgatcaagaag
ggcgtggtgctggtgggtttccatgagcgcaaaagccgttacgtggccgacatggcgcaa
tgccccgtgctgccgccccatgcggcggcgctgctgatgccgctgcgctcgctgatcgcc
gcgctggatgcgcatgacagttgcccgcagatcgagctggcctgcggcgacagcgtgacc
gcgctggtgctgcgccacctgcagccgctgagcgtgggcgatcacgcccggttgcgcgcc
tttgcggccgagcacggcgtgcaatggtggctgcaaccccggggtccggacaccgtgcaa
ccactggacgagggcggcgagcaactgtcctacgccctgccggacttcggcatcacgatg
ccgttcaagcccaccgacttcacccaggtcaacccccatatcaaccgtgtgctggttgcg
cgcgcgttgcggctgctggcggtgcgccccgatgagcgcgtgatcgactggttctgcggt
ctgggcaactttacgctgccactggccacacaggcgcgtgcggtgctgggcgtcgaaggc
aacgcggccctggtcgcccgtgcgcgcgcgaaccatggcctgaaccaggccctggcgcag
aaccatcgcgtgctggctgccaccgatttcgtggcctgcaacctgttcgcgatgactccc
ggaatgctgctgggccatggtgcggccgacaagtggctggtcgacccgccccgcgagggc
gccctggccctggtcaaggcgctggccgacatcgagcagtcgcgccgaggtgcgcagggc
gctactgcgctgcccgccggcgccgaggactgggtgccgccccggcgcattgtctacgtc
agttgcaaccccgccacgctggcgcgggatgccgctttgctggtgcatctggcaggctac
cagtgcgcggcggcagggatggtgaacatgttcccgcacaccgcccatgtcgagagcatc
gcggtgttcgagcggggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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