KEGG   Vibrio sp. EJY3: VEJY3_02280
Entry
VEJY3_02280       CDS       T01683                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
Organism
vej  Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:vej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vej03009]
    VEJY3_02280
Enzymes [BR:vej01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     VEJY3_02280
Ribosome biogenesis [BR:vej03009]
 Prokaryotic type
  rRNA helicases
   VEJY3_02280
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Helicase_C_2 AAA_11 UTP25 AAA_22 AAA_30
Other DBs
NCBI-ProteinID: AEX20954
Position
1:complement(509152..510375)
AA seq 407 aa
MIRTFAELDLDSNLLDAIEEMGFERPTKVQAEAIPQALDGRDILASAPTGTGKTAAFVLP
ALQYLQDFPRRKPGPARILILTPTRELAMQVADQARALAKNTKLNIFTITGGVQYQEHAD
ILATTQDIVVATPGRLREYIEAERFDCRAIEWLILDEADRMLDMGFAPTVDRLSNECRWR
KQTLLFSATLEGRGVEGFTADLLNEPAEIDAKSPLRERKKIAQWYHRADDAEHKLALLKH
IITEQAERTIVFLKTRERLAELRSQLESAQIPCSWIQGEMPQDRRNNAIARFRDGTVNVL
LATDVAARGIDLPDVSHVINYDLPRTADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDR
VARYVKEDIKERFIKEMRPKHKKPVFKKKKKKDDKKKTAKKKVAKKK
NT seq 1224 nt   +upstreamnt  +downstreamnt
gtgatcagaacctttgctgaacttgatctagactcaaacttacttgatgccattgaagaa
atgggcttcgaacgcccaacaaaagtccaggcagaagcaatcccacaagcgttggatggt
cgtgacattctagcgtcagcaccgactggcacaggtaaaacagcagcattcgtattgcct
gctctacaatacctacaggattttccacgtcgtaaacctggacctgcgcgtatccttatc
ctaaccccaacgcgtgagttggcgatgcaggttgcggatcaagcccgtgcactggcgaaa
aatactaagctcaatatttttaccatcaccggtggcgttcagtaccaagagcacgctgac
attcttgctaccacgcaagacatcgttgttgcgacaccaggtcgtctgcgcgaatacatt
gaagctgaacgctttgattgtcgtgcgattgaatggttaatcctagacgaagccgaccgc
atgctagacatgggctttgcgccaacagtcgatcgtctatcgaacgagtgtcgctggcgt
aagcaaacccttctgttttctgcaacattagaaggcagaggcgttgaaggctttactgcg
gacctgctgaatgaacctgcagagatcgatgcgaagtcaccgctacgcgaacgcaagaag
atcgcacagtggtatcaccgagcggacgacgcagagcataaactcgcgctactcaagcac
atcatcacggagcaagcagaacgtactatcgtgttcctgaaaacgcgtgaacgtctggct
gaactgcgtagccagcttgaaagcgcacagattccatgttcatggattcaaggtgaaatg
ccacaagatcgccgtaataacgcgattgcacgtttccgtgatggtacggttaacgttcta
ctcgcaacagacgttgcggctcgtggtatcgaccttcctgatgtgtcacacgtgatcaac
tacgacttgccacgtacagcagatgtttacctgcaccgaattggccgtaccgctcgtgct
ggtaaaaaaggtaacgctatctcaattgtagaagcgcacgaccagccaatgatggatcgc
gttgctcgttacgtgaaagaagacatcaaagagcgtttcatcaaagagatgcgtccaaaa
cacaaaaaacctgtgtttaagaagaaaaagaaaaaagacgataagaagaaaactgcgaaa
aagaaagtcgctaaaaagaagtaa

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