KEGG   Vibrio sp. EJY3: VEJY3_10720
Entry
VEJY3_10720       CDS       T01683                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
vej  Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:vej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vej03009]
    VEJY3_10720
Enzymes [BR:vej01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     VEJY3_10720
Ribosome biogenesis [BR:vej03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VEJY3_10720
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF3603 Cupin_2 Orexin
Other DBs
NCBI-ProteinID: AEX22624
Position
1:complement(2380215..2381159)
AA seq 314 aa
MSEIRTKVQFVDIDEDMAGQRIDNFLRNQLKDIPKSMIYRIVRKGEVRVNKKRIKAEYKL
KAGDLVRIPPVTMEKKEDDVAPSTKLNRVAELEDMIIFEDDHMLILNKPSGTAVHGGSGL
KFGAIEALRALRPEARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFRAKTVKKFYFAL
VMGQWKSSCKVVNAPLLKNEVNSIVRVNPNGKPSETRFKILEKFEQATLIQASPITGRTH
QIRVHTQYAGHPIAWDDRYGDRRFDAYTGQYGLDRLFLHAANIKFQHPSNDEWMEINAKM
EPKLEKVLAGLRKA
NT seq 945 nt   +upstreamnt  +downstreamnt
atgagcgaaataagaactaaagtccagtttgtcgacatcgatgaagacatggcggggcag
cgcattgataactttttgcgcaaccaattaaaagacattccgaaaagcatgatttataga
atcgtgcgaaagggtgaggtacgcgttaataaaaagcgtattaaagcagagtacaaacta
aaagcgggcgatctggttcgtattcctccggttactatggagaagaaagaagacgacgta
gcgccgagcacgaaacttaatcgcgttgctgagcttgaagatatgatcatttttgaagat
gaccatatgcttattctcaacaaaccatccgggaccgcggttcatggcggtagtggtttg
aagtttggtgcgatagaagcgctgcgtgctttacgtcctgaagcacgttttcttgagctt
gtgcatcgtattgaccgtgatacctctggtattttacttgtggctaaaaagcgttcagcg
cttcgccacctacaagcacagttccgagcaaaaacagtgaagaagttttattttgcactg
gtgatggggcagtggaaaagcagttgtaaagtggttaacgcgccattgttgaaaaatgaa
gtaaacagcatcgttcgtgttaatccaaacggtaagccatctgagacacgctttaagatc
ttggagaagttcgaacaggcgaccttgattcaagcgagcccgatcactgggcgtacacac
caaattcgtgtccatacgcagtacgccgggcacccaatcgcttgggatgaccgttatggt
gaccgccgttttgatgcttacactggtcagtatggtctggataggttgttccttcatgcg
gcgaatattaagttccagcacccttcaaatgatgaatggatggaaattaacgcgaagatg
gaacctaagttagagaaagtgctggctggtttaagaaaagcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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