KEGG   Vollenhovia emeryi: 105561937
Entry
105561937         CDS       T06016                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
  KO
K20101  ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
Organism
vem  Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:vem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vem03019]
    105561937
Enzymes [BR:vem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     105561937
Messenger RNA biogenesis [BR:vem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     105561937
SSDB
Motif
Pfam: Helicase_C DEAD OB_NTP_bind HA2_C AAA_22 AAA_19 Ribophorin_I HA2_N nSTAND3 PIMT_C AAA_7
Other DBs
NCBI-GeneID: 105561937
NCBI-ProteinID: XP_011867722
Position
Unknown
AA seq 1125 aa
MKRRSPRHYRKSDNSSESHRGDGDHFYFSKCKHELNKTFTANFNLVDDVVDFWKFVEKYE
SVKKRLGDNDESDSALNSIGLPEKYHKSHCLNLKLSLSYRELFARVPETRSLTESRLLQF
RDVILLYLDFKQKEKFAKLKKLRDTQANLPVARYKQEIVEMIKTEKVMIVAGDTGCGKST
QIPRYLYEAGFQKIACTQPRRIACISLAKRVAFETLSENLSRVGYQIRFEKQRNQETNIT
FITEGLLLRQLSGESTLSAYNVIVLDEVHERHLHGDFLLGIMKCIINQKPDLKLLLMSAT
INIQLFSHYFAKENVKIIEVPGRLYPIQLLYRPVTVQDLQYKNDRFNPSPYVQIMQIIDE
KYPVDEKGDLLIFLSGISEITAVVDAAKEYSLKKNNWIVLPLHSTLSIVEQDKVFDYAPD
GVRKCIVATNIAETSITIDGIRFVADSGKVKEMSYDPSCKMQKLKEFWISKASAEQRKGR
AGRTGPGVCYRIYSEEEYKMLEKYSTPELQRVPLDSSLLQMIAMGLPDARKFPFIEPPAA
NSIENAILSLKDHGALMENEKITCVGKTLARLPVDITIGKMLIMGSIFHQVEPVLSLAAA
LSIQTPFTNRAYRDAECETSRKKLESDHGDPITLLNTFKEWLEVKQENSQEYRSSSNSSR
RWCKRRGLEEQRFYEMTKLRAQFKDLLQDCNLLKSLPEPNSSMTSAERAIRHGELKLLKT
LKRTYKQSEPKKRKQLKVETFDIQLEDDDNGQLDIKDIEFRMRNDSSQVQNLLTASTACS
YKDLTMLKLILCSGLYPQFACADEFNYCKSMSEQLFHTKAKPYVALHPMSFFGNHPQVLQ
IEEADVMPVPGFKNKTPISSKHQILAYLSLLETTKPYLVNTLRMPAAQTLLLFAHEIDTN
STFSIIACDSWLMLEFPVADSGQILLMKATKLRNKWDFLLNQQLQGSDSANDERKDFSTV
EQSLTQELIEYMHTTIPYTIRRLLPADLKMIYVGNGNNDTHIEPNPFHPTFTSIPNVIKG
GAYVTDNITYNCIKETSWSEQLIVEMQETEWHCENCNLEAILSSIEKLQHQNSCVIADPI
SVGEKSKHITRKANSQAYECPDCSLTLYLTPIEILKHKKLHVKAS
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgaagcgacgttcgcctcgacattaccgcaaaagcgataactcatcggaaagtcatcgc
ggagatggcgaccatttctatttcagcaaatgtaaacacgaattaaataagactttcaca
gcaaatttcaatcttgttgacgacgtcgtagacttttggaaattcgtcgagaaatacgag
tctgtgaagaagcgactgggcgacaatgacgagtctgattccgctctaaattccatcggg
ctcccggaaaagtatcacaagtcccattgtctaaacttgaaactgagtttgtcctaccgc
gaattgtttgccagagtcccagagacgagatcgttgaccgagtcgcgactgctccagttc
agagatgtgatactcttgtatctcgactttaagcaaaaggagaaatttgctaaattaaaa
aagctccgagacacgcaggccaacttaccggttgcgcgatacaagcaagagattgtcgag
atgattaagactgagaaagtaatgatcgtggcaggcgatactggttgcggcaaatctact
cagatccctcgctacttgtacgaagctggtttccaaaagattgcttgcacccaaccccga
agaatagcgtgcatctcgttggcaaaacgagttgcttttgaaacattgagcgagaatctt
agtagagttggctatcagatacgattcgagaaacagagaaaccaagagacaaacatcacg
ttcataacagagggcctcttgttgcgccagctgtcgggtgagtcaactttgtccgcgtac
aacgtcatagtcttggacgaagtgcacgaacgtcatctgcacggcgactttttattgggc
attatgaaatgcatcattaatcagaaacccgacctgaaattgctactaatgtccgccact
attaatatacaacttttcagtcattattttgctaaggaaaatgttaagataatagaggtc
cccggaagattatatcccattcaattgctctatcgccctgtaaccgtacaggacctccaa
tacaaaaacgatcgattcaatcctagtccttatgtgcaaataatgcaaataattgatgaa
aaatatccagtcgatgagaagggtgatttgttaatattcttgagcgggataagcgaaatt
accgcggtcgtagacgctgccaaagaatatagtctcaagaagaataactggatagtctta
ccgctccacagtactctctctatcgttgaacaagacaaggtatttgactatgcacctgac
ggtgttaggaaatgtattgtcgcaaccaacatcgccgaaacttccattaccattgatgga
atcagatttgtcgctgatagtggaaaggtgaaggaaatgagttacgatccctcgtgcaag
atgcaaaaactgaaagaattttggataagcaaggccagtgcggaacagagaaaagggaga
gcaggcaggactggacctggggtttgttacagaatttattcagaggaagagtacaaaatg
ttggagaaatattcaacgccagagctacaacgtgtacctttagattcttcactattgcag
atgatagcgatgggacttcctgatgcccgaaagtttccatttatagaaccaccagcagcc
aatagcatagaaaatgctatactatccttgaaagatcacggtgcacttatggagaacgaa
aagattacgtgtgtcggtaaaaccttggcacggctgcccgttgatattacgatagggaag
atgttaatcatgggatccatttttcatcaggtcgaacccgtgttgtcattggccgctgct
ctaagtatacaaacgccgttcaccaacagagcttacagagacgccgagtgtgagacatct
aggaagaagttggaatctgatcatggcgatccaataacgttgttgaatacattcaaagag
tggctggaagtaaaacaagaaaactctcaagaatacagaagcagtagcaacagcagcaga
aggtggtgcaaaagaagaggtttggaggaacaacggttctacgaaatgacgaaattgagg
gctcaatttaaagacttgctccaagactgcaatttgctcaagagtctcccagaaccaaat
tcttccatgacgagcgcagaacgtgcgataaggcatggagaattgaaacttttgaaaact
ctcaaaagaacttacaagcaaagtgaacctaaaaagcgtaaacaattaaaagtagaaacg
ttcgatatacaattggaggatgacgataacgggcagctcgacataaaagatatagaattt
cgaatgagaaacgactctagtcaggtgcaaaatcttttaacagcgtctaccgcgtgtagc
tataaagatctgacaatgttgaagttgatattatgtagcggtttatatccacaatttgct
tgtgccgacgagtttaattattgcaagtctatgagtgagcaactctttcacacgaaagca
aaaccgtacgttgctttgcatccaatgagcttttttggaaatcatccacaagttttacaa
atcgaagaagcggatgttatgccagtgccaggatttaagaacaagactcctataagctcg
aaacatcagatattggcgtatctatcccttttggaaactacaaaaccgtatctggtaaat
actttaagaatgcctgctgcccaaacgttgctattatttgcgcatgaaatagacacaaat
agcacattctccataatagcatgcgattcgtggctcatgttggaatttcctgttgctgac
agtggtcaaatcttattgatgaaagctaccaaattaagaaataagtgggatttcttatta
aatcagcaattgcaaggttccgacagtgccaatgacgagagaaaagattttagtacagtc
gaacaaagtcttacgcaagaactgatcgaatatatgcatactacgataccatacaccata
agacggctgttaccagccgatctgaaaatgatatatgtcggtaatggcaataatgacacg
catatagagcctaatcctttccatcccacttttacaagtataccaaatgtaattaaaggt
ggggcttatgtcacagataatattacatataattgcataaaagaaactagttggagcgaa
cagttgattgtagaaatgcaagaaaccgaatggcattgtgaaaattgtaatcttgaagca
attctatcgagcatcgagaaacttcagcatcagaactcttgcgtaatcgcggatccgatt
agtgtcggtgaaaagagtaaacatattacacgtaaagctaatagtcaagcatacgagtgt
ccagattgttcgttaacgttatatctcacgcctatcgaaatattgaagcataaaaagtta
catgtcaaagccagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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