KEGG   Verrucosispora sp. NA02020: HUT12_10745
Entry
HUT12_10745       CDS       T06958                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ver  Verrucosispora sp. NA02020
Pathway
ver03030  DNA replication
ver03430  Mismatch repair
ver03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ver00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HUT12_10745 (dnaE)
   03430 Mismatch repair
    HUT12_10745 (dnaE)
   03440 Homologous recombination
    HUT12_10745 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ver03032]
    HUT12_10745 (dnaE)
   03400 DNA repair and recombination proteins [BR:ver03400]
    HUT12_10745 (dnaE)
Enzymes [BR:ver01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HUT12_10745 (dnaE)
DNA replication proteins [BR:ver03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HUT12_10745 (dnaE)
DNA repair and recombination proteins [BR:ver03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HUT12_10745 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: QKW13225
UniProt: A0A7H8K9E0
Position
2444873..2448406
AA seq 1177 aa
MGDSFAHLHVHTEYSMLDGAARLKDLFAEVKRQGMPAVAMTDHGNMHGANDFYKQAMAAG
VTPILGIEAYVAPESRFHKKRVRWGRPEQKSDDVSGSGGYTHKTIWARNKTGLHNLFTLT
SKAYTEGYFVKWPRMDAELLAECADGLMATTGCPSGEVQTRLRLGHDAQALEAAAKYQDI
FGKENYFLELMDHGLDIEKRVRDGLVEIGRKLGIPPVVTNDSHYTHEAQSEAHDVLLCVQ
TGSNVADPNRFKFGGSGYYIKSADEMRGVDGSDVWLEGCRNTLLVAERVDPTGMFEFHNL
MPRFPVPEGETEESWFRKETFVGLARRYPQGIPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKNQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGYPYAVGDRITKAMPP
AVMGKDIPLEGIFDPKHPRYAEAGEIRGMYESEADVKKVIDTARGIEGLIRQTGVHAAGV
IMSAEPIIEHIPLMRRDSDGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGKELDLLGLPLDDKPAYELLARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLREILAPTYGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFGPFRDGCREHGYSDEAVQKVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMAMYLSECRRMGIQVLPPDVNTSA
GPFTPVGKEIRFGLGAIRNVGANVVAAIMRCRDEKGEYADFYDFLSKVDAVVCNKKTIES
LIKAGAFDSLKHSRKALLTVHADAIDAYADVKRKEAVGQYDLFGSGFGDTETATTTTVMP
VISDGEWDKRDKLAFEREMLGLYVSDHPLFGLEHVLNAAADCTIATLSEEGTVPDGAVVT
LAGILSGVQRRVTKQGRAWASATLEDLAGGVEALFFPNTYEVIGQYIAEDAIVVVKGRID
RRDDTPRIMAMDMQLPDVSSNPASKPVTLTIPVNRLTPPLADRLKETLLLHPGDTEVHVK
LHRSGRVETWRLGLFRVAATTALMGDLKSVLGPANVS
NT seq 3534 nt   +upstreamnt  +downstreamnt
gtgggcgattcgttcgcgcatctgcacgtgcacacggagtactcgatgctcgacggtgcg
gcccgcctcaaggacctgttcgccgaggtcaagcggcaggggatgccggccgtggcgatg
accgaccacggcaacatgcacggcgcgaacgacttctacaagcaggccatggccgccggg
gtcaccccgatcctgggcatcgaggcgtacgtggcgccggagtcgcggttccacaagaag
cgggtgcgctggggtcgcccggagcagaagagcgacgacgtctccggcagtggcggttac
acgcacaagacgatctgggcgcgcaacaagaccggcctgcacaacctcttcacgctgacc
agcaaggcgtacaccgagggctacttcgtcaagtggccccggatggacgccgagctgctg
gccgagtgcgccgacgggctgatggcgaccaccggctgcccctccggcgaggtgcagacc
cggctgcggctcggccacgacgcgcaggccctggaggccgccgcgaagtaccaggacatc
ttcggcaaggagaactacttcctggagctgatggaccacggcctggacatcgagaagagg
gtccgggacgggctggtcgagatcggtcgcaagctgggcatcccgccggtggtcaccaac
gactcgcactacacgcacgaggcgcagtccgaggcgcacgacgtgctgctctgcgtgcag
accggcagcaacgtcgccgacccgaaccggttcaagttcggcggcagcggctactacatc
aagtccgccgacgagatgcgcggtgtggacggctccgacgtctggctggagggctgccgc
aacacgctgctggtggccgagcgggtcgacccgaccgggatgttcgagttccacaacctg
atgccgcgcttcccggtgcccgagggcgagaccgaggagtcctggttccgcaaggagacc
ttcgtcggcctggcccgccgctacccgcagggcatccccgagggccacgtcgtgcaggcc
gagtacgagctgggcgtcatcatccagatgggtttcccgtcgtacttcctcgtggtcgcc
gacttcatccagtgggccaagaaccagggcatcgcggtcggccccggccggggttcggcg
gccggttcgctggtcgcgtacgcgctgggcatcaccgacctggacccgatcccgcacggg
ctgatcttcgagcggttcctcaaccccgagcgcgtctccatgccggatgtcgacatcgac
ttcgacgagcgtcggcgcggtgaggtgatcaagtacgtcaccgacaagtggggcgaggac
aaggtggcgcagatcgccaccttcggcacgatcaaggcgaaggccgcgatcaaggactcg
gcgcgggtgctcggctacccgtacgcggtcggcgaccggatcaccaaggccatgccgccg
gccgtgatgggcaaggacatcccgctcgaaggcatcttcgacccgaagcacccccggtat
gccgaggccggcgagatccggggcatgtacgagtccgaggccgacgtcaagaaggtcatc
gacaccgcccggggcatcgaggggctgatccggcagaccggtgtgcacgccgccggtgtg
atcatgtcggccgagccgatcatcgagcacatcccgctgatgcgtcgggactccgacggg
gtcatcatcacccagttcgactacccgacgtgcgagtcgctcgggctgttgaagatggac
ttcctcggcctgcgcaacctcaccatcatcgacgacgcggtcaagaacatccagctcaac
cacggcaaggaactcgacctgctgggcctgccgctggacgacaagcccgcgtacgagctg
ctggcccggggcgacaccctgggcgtgttccaactcgacggcgggccgatgcggtcgctg
ctgcggatgatgaagccggacaacttcgaggacatctccgccgtgctggcgctgtaccgc
cccggcccgatgggcgtcgactcgcacaccaactacgcgctgcgcaagaacggcctccag
gagatcaccccgatccacccggagctggaggagccgctgcgggagatcctcgcccccacc
tacggcctgatcgtctatcaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
acgctcggccaggccgacctgctgcgtcgggcgatgggcaagaagaagaaggagatcctc
gacaaggagttcggcccgttccgggacggctgccgcgaacacggctactccgacgaggcc
gtccagaaggtctgggacgtgctggtcccgttcgccgggtacgccttcaacaaggcgcac
tcggccgcgtacgggctggtgtcgtactggacggcgtacctgaaggcgcactacccggcc
gagtacatggcggcgctgctgacctccgtcggcgacgacaaggacaagatggccatgtac
ctgtcggagtgccgccggatgggcatccaggtgctgccgccggacgtgaacacctccgcc
gggccgttcaccccggtcggcaaggagatccgcttcggcctcggcgcgatccgcaacgtc
ggcgccaacgtggtggcggcgatcatgcggtgccgcgacgagaagggcgagtacgcggac
ttctacgacttcctgtccaaggtggacgcggtggtctgcaacaagaagaccatcgaatcg
ctgatcaaggccggggcgttcgactcgctcaagcattcgcgcaaggcgctgctcaccgtg
cacgccgacgccatcgacgcgtacgccgacgtgaagcgcaaggaggccgtcggccagtac
gacctcttcggttcgggcttcggcgacaccgagacggcgaccaccaccacggtcatgccc
gtcatcagcgacggcgagtgggacaagcgcgacaagctcgcgttcgaacgcgagatgctc
ggcctgtacgtctccgaccacccgctgttcggtctggaacacgtgctgaacgcggcggcc
gactgcaccatcgccaccctgtccgaggagggcaccgtgcccgacggcgcggtggtcacc
ctcgccggcatcctctccggcgtgcagcgtcgggtcaccaaacagggccgagcgtgggcc
tcggcgaccctggaggacctggccggtggggtggaggcgctgttcttcccgaacacctac
gaggtgatcggacagtacatcgccgaggacgccatcgtggtggtcaagggccggatcgac
cggcgcgacgacaccccccgcatcatggcgatggacatgcagttgccggacgtcagcagc
aacccggcgagcaaaccggtcaccctgacgattccggtcaaccggctcacgccaccgctc
gccgaccggctcaaggagaccctgctgctgcatcccggcgacaccgaggtgcacgtgaag
ctgcaccgcagcgggcgcgtcgagacctggcgactcggcctgttccgggtcgccgccacc
accgccctgatgggtgacctcaagagcgtcctcggccccgccaacgtgagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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