KEGG   Aliivibrio fischeri ES114: VF_1064
Entry
VF_1064           CDS       T00236                                 
Symbol
gadA
Name
(GenBank) glutamate decarboxylase A, PLP-dependent
  KO
K01580  glutamate decarboxylase [EC:4.1.1.15]
Organism
vfi  Aliivibrio fischeri ES114
Pathway
vfi00250  Alanine, aspartate and glutamate metabolism
vfi00410  beta-Alanine metabolism
vfi00430  Taurine and hypotaurine metabolism
vfi00650  Butanoate metabolism
vfi01100  Metabolic pathways
vfi01110  Biosynthesis of secondary metabolites
vfi01120  Microbial metabolism in diverse environments
vfi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vfi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    VF_1064 (gadA)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    VF_1064 (gadA)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    VF_1064 (gadA)
   00430 Taurine and hypotaurine metabolism
    VF_1064 (gadA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VF_1064 (gadA)
Enzymes [BR:vfi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.15  glutamate decarboxylase
     VF_1064 (gadA)
SSDB
Motif
Pfam: Pyridoxal_deC
Other DBs
NCBI-ProteinID: AAW85559
UniProt: Q5E5Y7
Position
I:1176030..1177424
AA seq 464 aa
MPLHSKNAVRDDLLDDIYSSADLSLSMPKYKMPEQEHDPRHAYQVIHDELMMDGNSRQNL
ATFCQTWVEDEVHKLMDECIDKNMIDKDEYPQTAELESRCVHMLADLWNSPDAENTLGCS
TTGSSEAAMLGGMALKWAWREKMKKLGKPTDKPNMICGPVQVCWHKFARYWDIELREIPM
EGDRLIMTPEEVIKRCDENTIGVVPTLGVTFTCQYEPVKAVHEALDKLQEETGLDIPMHI
DAASGGFLAPFCDPDLEWDFRLPRVKSINASGHKFGLSPLGVGWVIWRDASALHEDLIFN
VNYLGGNMPTFALNFSRPGGQIVAQYYNFLRLGKEGYRKIHQACYDTAVYLSSEIEKLGM
FEIIYDGKGGIPAMSWSLKEGVDPGFNLFDLSDRIRSRGWQIAAYAMPPKREDLVIMRIL
VRHGFSRDQADLLVADLKHCVEFFAKHPISHGSDELESSGFNHG
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgcctcttcattccaaaaacgcagtcagagatgatcttcttgatgatatttattcatca
gctgacctttcgttatccatgccaaaatataaaatgcctgaacaagaacatgacccacgt
catgcctaccaagtcattcatgatgagctcatgatggatggtaattctcgacagaactta
gcaacgttttgccaaacttgggttgaagatgaagtccataaattaatggatgaatgtatc
gataaaaatatgatcgataaagatgaataccctcaaactgctgaattagaatctcgctgt
gtgcatatgctagcggatttatggaactctcctgacgcagaaaacacactaggttgttcc
actacaggttcaagtgaagccgctatgctaggtggtatggcattaaaatgggcttggcga
gaaaaaatgaaaaaacttggcaaaccaacagataagccaaatatgatctgtggtcccgtt
caagtatgttggcataaatttgcacgttattgggatattgaattacgtgagatcccaatg
gaaggcgatcgcttgatcatgacgcctgaagaagtgattaaacgttgtgatgaaaatacc
attggtgttgttccaacactgggggtgacttttacttgtcaatatgagcctgtgaaagcg
gtacatgaagcgctagataagttacaagaagagacgggtttagatattccaatgcacatt
gatgcggcgagtggtggtttcttagctccgttctgtgatcctgatttagagtgggacttc
cgtcttcctcgagttaaatcgattaatgcatcaggtcataaatttggcctaagcccacta
ggtgtgggttgggtaatttggcgtgacgcatcagccttgcatgaagatttgatttttaat
gtgaactatttaggtggcaatatgccgacctttgcattgaacttctctcgcccaggtggc
caaattgtagcgcaatactacaatttcctacgtttaggaaaagaagggtatcgtaagatc
caccaagcgtgttatgacactgctgtttatttatcatctgaaattgaaaaactgggtatg
tttgaaattatctatgatggtaaaggtggtattccagcaatgagttggtcattgaaggaa
ggagttgatcctggttttaatttgtttgacctatcggatcgaattcgttctcgtggttgg
caaattgcggcttatgcaatgccaccaaaacgtgaagatttagtcatcatgcgtatttta
gtacgtcatggattcagtcgagatcaagcggatttattggttgcggacttaaaacattgc
gttgagttttttgctaagcatcctatttcccatggtagtgatgagttggaatcatcagga
tttaaccacggctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (63)   

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