KEGG   Vibrio fluvialis: AL536_06785
Entry
AL536_06785       CDS       T04379                                 
Name
(GenBank) RluA family pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
vfl  Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:vfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vfl03009]
    AL536_06785
   03016 Transfer RNA biogenesis [BR:vfl03016]
    AL536_06785
Enzymes [BR:vfl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     AL536_06785
    5.4.99.29  23S rRNA pseudouridine746 synthase
     AL536_06785
Ribosome biogenesis [BR:vfl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AL536_06785
Transfer RNA biogenesis [BR:vfl03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    AL536_06785
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AMF93149
UniProt: A0A109X3S3
Position
1:1462272..1463942
AA seq 556 aa
MPHSDRCFTPFKADVSAIALPERFTFPFCYEPHALCVIAADELQQHIRTQQEWSHPFGLE
DDEAGASGKMFGVLVVKNSAGQLGYLSAFSGQLAEQNHLPGFVPPVFDRFADDAFFRTEA
NQIAAINQQVRELKQNTQADTLRSAISAHQQQAESEIEALRLHMIETRAERKQLRAEANA
DDQHALLERLAKESVTEKNQLKQLKLMWEQRIRALQDELAAQNAELHALQEQRKQLSAAL
QRKLFAQYRFLNKRGDVQSLNDIFSLAANPIPPAGSGECAAPKLLQYAFTHQLTPIAMAE
FWWGRSPKSEIRQHKKFYPACQNKCHPILGHMLSGMVLDDNPLLENPAEGKEIEIVYQDE
AIVVINKPAEFLSVPGVNVKDSALTRLEQQFPDAEGPFVLHRLDMSTSGLLVFALTRRAN
KSLQKQFITRGVEKRYVALLSGEIPLGEGSITLRLRPDLDDRPRQMVCFEHGKAAETDWQ
TIRTEQGRTRVYLHPKTGRTHQLRVHCAHEQGFNTPILGDDLYGEKADRLHLHAESLSFD
HPYTKQRMTFQVDPAF
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgccacactctgaccgctgctttacaccttttaaggccgacgtttccgctattgctttg
ccggaacgttttacctttccgttttgttacgagccgcatgctctgtgtgtgattgctgcc
gatgaactgcagcagcatatccgcacccagcaagagtggtcacatccgttcggtcttgaa
gacgatgaagcgggcgctagcggcaagatgttcggcgtactggtcgtcaaaaacagcgct
gggcagctgggttatctctctgctttttccggccaactggccgagcaaaaccatctaccg
ggctttgtgccgccggtatttgatcgctttgccgacgacgctttctttcgcaccgaagcc
aaccagattgccgccatcaatcaacaagtgcgagagttgaagcaaaacacccaggcagac
acgctgcgcagcgcgatttctgcgcaccaacagcaagcagagtcggagattgaagcgctg
cgcctgcacatgatcgagactcgcgctgagcgtaagcagttacgcgccgaagccaacgca
gatgatcagcatgcactgctggagcgcttggcgaaagagagtgtgactgagaaaaatcag
ctcaaacagttaaaacttatgtgggagcaacgtattcgcgccttacaggatgagttagcg
gcacaaaacgccgaacttcatgcgttgcaggagcagcgtaaacagctctcggcggcgctg
cagagaaagctgtttgcccaatatcgtttcttaaacaaacgcggtgatgtgcagtcgctg
aatgacattttctcactcgcggccaatccgatcccacccgcaggctcaggggaatgcgca
gcacccaaactgctgcaatacgcgtttacgcatcaactgacaccgatcgcgatggcggaa
ttctggtgggggcgttctcccaaatcagaaattcgccagcacaagaaattctatccggcc
tgccaaaataagtgtcatccgatccttggccatatgctgagtggtatggtactcgacgac
aatccgctgctggaaaacccggcagaaggtaaagagatcgagattgtgtatcaggatgaa
gcgattgtggtgatcaacaaaccagccgagtttctctccgtgcccggtgtgaacgttaaa
gactctgccttgacgcgattggaacagcaatttcccgatgcggaaggtccgtttgtgttg
catcgtctggatatgtcgacttcggggttattggtcttcgctctcactcgtcgcgcaaat
aaaagcctacaaaagcagtttattactcgcggtgtagagaagcgctatgtggcgctgctg
agtggtgaaatccctctcggcgaaggcagtattaccctgcggctgcgtccagacttagac
gatcgtccacgtcagatggtctgttttgagcacggcaaagccgccgaaactgactggcag
acgatccgtaccgaacaagggcgtacgcgagtttatctgcatcctaagacagggcgcact
catcagttgcgagtgcactgcgcccatgagcaaggtttcaatacgccgattctgggtgat
gatctctatggtgagaaagccgatcgcctgcacctgcatgcggaaagtctcagctttgat
cacccttacaccaagcagcgcatgacttttcaggtcgatccggcgttttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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