KEGG   Vibrio fluvialis: AL536_16010
Entry
AL536_16010       CDS       T04379                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10912  two-component system, repressor protein LuxO
Organism
vfl  Vibrio fluvialis
Pathway
vfl02020  Two-component system
vfl02024  Quorum sensing
vfl05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vfl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AL536_16010
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AL536_16010
   05111 Biofilm formation - Vibrio cholerae
    AL536_16010
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vfl02022]
    AL536_16010
Two-component system [BR:vfl02022]
 Lux family
  LuxQN/CqsS-LuxU-LuxO (quorum sensing)
   AL536_16010
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg HTH_8 AAA_5 Mg_chelatase AAA AAA_16 AAA_2 AAA_19 HTH_23 AAA_22 cREC_REC TIP49 HTH_30 HTH_38 HTH_29 HTH_7 PIF1
Other DBs
NCBI-ProteinID: AMF94947
UniProt: A0A120L418
Position
2:complement(1807947..1809296)
AA seq 449 aa
MVEDTASVAALYRSYLTPLEIDINIVGTGREAIESIAHREPDLILLDLRLPDMTGMDVLH
AVKQRSPDVPVIFMTADTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKNEADN
PGNQNYQGFIGSSQTMLAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASRRGDKP
FIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADGGTLFLDELCEMDLDLQTK
LLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPL
RERGDDVIEIAYSLLGYMSKEEGKGFVRLAPEVVERFKQYEWPGNVRQLQNVLRNVVVLN
EGREINLNMLPPPLNHPSENIISVPKVNAAPVSVHEIFPLWMTEKQAIEKAIEACDGNIP
RAAGYLDVSPSTIYRKLQTWNEKVQEKEK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggtcgaagatacggcgtcagtggcggcgttatatcgctcgtacctgactccgctagag
atcgatatcaacatcgtcggaaccgggcgtgaagcgatcgaaagtatcgcgcaccgcgaa
ccggatctcatcctactcgatctgcgcctgccggacatgaccggtatggacgtattacac
gctgttaaacagcgctcgccggatgtacctgtgatttttatgaccgcagatacagcggtt
gaggcgatgcgtcatggcgcacaggatttcctcatcaaaccgtgtgaagcagaccgctta
cgtgtcacggtaaacaatgcgattcgtaaagccagcaagctgaagaatgaagctgacaac
ccgggtaaccagaattaccaaggctttatcggcagtagtcaaaccatgcttgcggtgtac
cgcaccattgactccgcggccagcagtaaggcaagtatcttcattactggagaaagcggt
acgggtaaagaggtgtgcgcggaagcgattcacgccgccagtagacgcggcgacaaacca
ttcattgcgattaactgtgccgcgattcctaaagatctgattgaaagtgaactgtttggt
catgttaaaggcgcatttactggcgcagcaacggatcgccagggcgctgcagaattggcc
gatggcggcactctgttccttgatgagctgtgcgaaatggatctcgatctgcagactaaa
ttgttgcgctttattcagaccggtaccttccagaaagtcggctcgtcaaaaatgaaaagt
gtggatgtgcgttttgtctgtgcgaccaaccgcgacccatggaaagaagtacaggaaggc
cgtttccgtgaagatttgtactaccgtttgtacgtcattccactgcatctgccgccttta
cgtgagcgtggcgatgatgtcattgaaattgcctactcgctgctgggctatatgtcgaaa
gaagagggcaaaggctttgtccgtctcgctccggaagtcgtggaacgttttaaacaatac
gaatggccgggtaatgtgcgtcaactgcagaacgtactgcgcaacgttgtggtgctgaat
gaagggcgtgaaatcaatctgaatatgctgccaccaccgctcaatcatccaagcgaaaac
atcatcagtgttccgaaggttaacgccgcgcccgtatcggttcacgaaatcttcccgttg
tggatgacggaaaagcaagccattgagaaagcgattgaagcctgtgatggcaatattccg
cgtgctgccggttatctggacgtcagcccatccactatttatcgcaaactgcaaacctgg
aacgagaaggtgcaggaaaaggaaaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (29)   

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