KEGG   Aliivibrio fischeri MJ11: VFMJ11_0444
Entry
VFMJ11_0444       CDS       T00754                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
Organism
vfm  Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:vfm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vfm03009]
    VFMJ11_0444
Ribosome biogenesis [BR:vfm03009]
 Prokaryotic type
  rRNA helicases
   VFMJ11_0444
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2 AAA_19 UTP25 CMS1
Other DBs
NCBI-ProteinID: ACH66058
UniProt: B5F9T7
Position
I:complement(462351..463592)
AA seq 413 aa
MIKTFADLDLSPNLLRALEEIDYQRPTQVQAMTIPEALEGKDILASAPTGTGKSAAFLLP
ALQHLDDFPRREPGPARILILTPTRELAIQVADEARQLAKYTRHKVFTITGGISYQDHAD
ILATTQDIVVATPGRLMEYIEAERFDCRAIETLILDEADRMLDMGFGPVVDRLSKECRWR
KQTFLFSATLEGRGVEGFTADLLNEPAEINAEPSRRERKKITQWYHRADNMAHKIDLLKS
ILKEQAERSIVFVKTRERLAELRGHLETAKIPCAWIQGEMAQESRNNAIARFRDGTVNVL
IATDVAARGIDLPDVSHVINFDMPRTADVYLHRIGRTARAGKKGNAVSLIEAHDQPMMER
VGRYIKEDEIIKERFIEGLKPKHKKPVFKNKQKKNAKKKAALAKKKAPKKKKK
NT seq 1242 nt   +upstreamnt  +downstreamnt
gtgatcaaaacgtttgctgacctcgatctatcacctaacctattgcgtgctcttgaggag
atagattatcaacgtccaactcaagttcaggctatgactatccctgaagcattagaaggt
aaagatattcttgcttctgcaccaacagggacaggtaaatctgctgcattcctattacca
gctcttcagcacttggatgatttccctcgccgtgagccaggacctgcacgtattcttatc
ttgacgcctacgcgtgaattagcgattcaagttgctgatgaagctcgtcaattagcaaaa
tatactcgtcataaagtatttacgattactggcggtattagctatcaagatcacgcagat
attttagctacgactcaagatatcgttgtagctacacctggccgtttaatggaatacatc
gaagctgaacgttttgattgtcgtgctattgaaacccttattcttgacgaagctgaccgc
atgctagacatgggctttggacctgttgtagatcgtctatctaaagaatgccgctggcgt
aagcaaaccttcttgttctctgcaacattagaaggtcgcggtgtagaaggttttacggct
gatctactgaatgaaccagcagaaatcaatgctgagccatctcgtcgtgaacgtaaaaaa
atcactcagtggtaccaccgtgcggacaacatggcacataaaattgacttgttaaaaagc
attttaaaagaacaagctgagcgctcaatcgtattcgttaaaactcgtgaacgtttagcg
gaacttcgtggccatttggaaacagcaaaaatcccttgtgcttggattcaaggtgaaatg
gctcaagaaagtcgtaataacgctattgctcgattccgtgacggtacagtaaacgtatta
attgcaacagacgttgctgctcgtggtattgatttacctgacgtttcacacgtaatcaac
tttgatatgccacgcactgctgatgtgtacttacatcgtattggtcgtaccgctcgtgca
ggcaaaaaaggcaacgctgtttctctaattgaagcgcatgaccaaccaatgatggaacgt
gtaggtcgctacattaaagaagatgaaatcattaaagaacgttttattgaaggcctaaaa
cctaagcataaaaaacctgttttcaaaaacaaacagaaaaaaaatgcgaagaaaaaagct
gctctagcgaagaaaaaagcaccgaagaaaaagaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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