KEGG   Aliivibrio fischeri MJ11: VFMJ11_0473
Entry
VFMJ11_0473       CDS       T00754                                 
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
  KO
K01955  carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Organism
vfm  Aliivibrio fischeri MJ11
Pathway
vfm00240  Pyrimidine metabolism
vfm00250  Alanine, aspartate and glutamate metabolism
vfm01100  Metabolic pathways
vfm01240  Biosynthesis of cofactors
Module
vfm_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:vfm00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    VFMJ11_0473 (carB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    VFMJ11_0473 (carB)
Enzymes [BR:vfm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)
     VFMJ11_0473 (carB)
SSDB
Motif
Pfam: CPSase_L_D2 CPSase_L_D3 MGS ATP-grasp ATP-grasp_3 Dala_Dala_lig_C ATPgrasp_Ter ATP-grasp_4 CoA_binding_2 HTH_17
Other DBs
NCBI-ProteinID: ACH65545
UniProt: B5FA67
Position
I:495301..498531
AA seq 1076 aa
MPKRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDM
ADATYIEPIHWEVVRNIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKTMDEAYQVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDAM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAIGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFDEMVDLDAPDA
LTKIRHELKDAGAERIWYIADAFRAGMSVDGVFNLTNVDRWFLVQIEDLVKEEEAVKAGG
FANLTADALRKLKRKGFADARLSKLLGVGESEIRRLRDQHDIHPVYKRVDTCAAEFSSDT
AYMYSSYDEECEANPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQVAVDRLELLQPENATVTTMEQAIDKSKEIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAIEVDVDAICDGEQVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSEEIQDVMRDQVRKLAFELGVRGLMNTQFAVKDNKVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAFAKAELGCSKEYPEGGRALLSVREGDKKRVVDLA
KHLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFASCLAHEADDRKTVNSVQELHAKVAAKYA
NT seq 3231 nt   +upstreamnt  +downstreamnt
atgccaaaacgtactgatattaaaagcgttctaattctaggtgcaggtccaattgtaatc
ggccaagcatgtgaatttgactactctggtgcacaagcgtgtaaagcacttcgtgaagaa
ggctaccgcgttattcttgtgaactctaaccctgcaacaatcatgactgacccagacatg
gctgatgcaacgtacattgaaccaattcattgggaagtggttcgtaacatcatcgaaaaa
gagcgtccagatgcggtattaccaacaatgggtggtcaaactgcattaaactgtgcgctt
gatttagaaaaacacggtgttcttgctgaattcggtgttgagatgattggtgcaacagct
gatgcaattgataaggcggaagaccgttctcgttttgataaagcaatgaaatcaattggt
cttgaatgtcctcgtgctgatactgcaaaaacaatggatgaagcatatcaagttttagat
atggttggtttcccatgtatcattcgtccgtcatttacaatgggtggtactggtggtggt
atcgcttataacaaagaagaatttgaagaaatctgtcgtcgtggtttggatctttctcca
accaatgaacttctaatcgatgaatcccttatcggttggaaagaatacgagatggaagtg
gttcgagataagaacgacaactgtattattgtatgtgcgattgaaaactttgatgcgatg
ggcattcacacgggagactcaatcacggtagcacctgcgcaaacactaacagacaaagaa
taccaattaatgcgtaatgcttctctagctgtactgcgtgagattggtgttgaaacgggt
ggttcaaacgttcaattcggtattaacccgaaagatggccgtatggttatcattgaaatg
aaccctcgtgtatctcgttcatctgctcttgcttctaaagcaacaggtttcccaattgca
aaaattgctgcaaaactggcaatcggctttacgcttgacgagttaatgaatgacattact
ggtggtgcaacgcctgcgtcatttgaaccaacaatcgactacgttgttactaagatccct
cgctttaacttcgaaaaattcgcaggggctaacgatcgcttaacaacacagatgaaatca
gttggtgaagtgatggctatcggccgtaatcaacaagaatctctacaaaaagcacttcgt
ggtctagaagtaggtgcgactggttttgatgagatggttgatttagatgctcctgatgca
ttaacaaaaattcgtcatgaactgaaagatgcaggtgctgagcgtatttggtatatcgca
gatgcgttccgtgcgggtatgtctgttgatggtgtgtttaatctaacgaatgttgaccgt
tggttcctagttcaaattgaagatttagtaaaagaagaagaagcggttaaagcgggtggt
tttgctaacttaactgcagatgcacttcgtaaacttaagcgtaaaggttttgctgatgcg
cgtctttctaaactattaggtgtgggtgagagtgaaattcgccgtctgcgtgaccagcat
gatatccacccagtatacaagcgtgtagatacgtgtgctgctgaattctcatcagatacg
gcttacatgtactcatcttatgatgaagagtgtgaagcaaacccaacagataaagataag
atcatgatcttaggtggtggtccaaaccgtatcggtcaaggtattgaatttgattactgt
tgtgtacacgcatcattagcattacgtgaagatggctacgaaactatcatggttaactgt
aaccctgagaccgtttctaccgattatgatacgtctgaccgtctatacttcgaaccagta
actctggaagatgtactagcaattgctcgtgttgaaaaaccaaaaggtgttatcgttcaa
tacggtggtcaaacaccacttaaactggctcgtgctcttgaagcagcaggtgttccaatc
attggtacaagccctgatgctatcgaccgtgcagaagaccgtgaacgcttccaagttgca
gtagaccgtctagagcttcttcaaccagaaaatgcaacggttactacaatggaacaggcg
attgataaatcaaaagaaatcggcttcccactagttgttcgcccttcttatgttcttggt
ggtcgtgcgatggaaatcgtatatgatgagcaagacttacgtcgttacttcaatgaagct
gtaagtgtttcaaatgaatctccagtacttcttgatagcttccttgatgatgctatagaa
gtggatgtagatgcgatttgtgacggtgagcaagtggttatcggcggtatcatggagcac
atcgaacaagcgggtgttcactctggtgactcagcatgttctcttcctgcttatacgtta
agcgaagaaattcaagatgtaatgcgtgatcaagtacgtaagctggcattcgagctaggt
gttcgtggcttaatgaatacacagtttgctgttaaagataacaaagtatatctaatcgaa
gttaacccacgagctgctcgtacggttccattcgtatctaaagcaactggtgcaccatta
gctaagattgcagcgcgtgtaatggcgggtcaatctctagagtctcaaggctttacgaaa
gagattatcccaccatactactcagttaaagaagtggtattaccgttcaacaagttccct
ggtgttgacccactgttaggcccagaaatgcgctcaacgggtgaagttatgggtgttggt
gcaacgtttgctgaagcatttgctaaagctgaacttggctgtagcaaagaatacccagaa
ggtggtcgtgcattactttctgttcgtgaaggtgataagaaacgtgttgtagatttagca
aaacatcttgttaaattgggttaccaactggatgcaactcacggtacagcggttattctt
ggcgaagcgggtattaacccacgtctagtaaacaaggtacacgaaggccgtcctcacatt
cttgaccgtatcaagaatggtgaatacacctacattgttaatactgcagcaggtcgtcaa
gcgattgaagattctaaagtattacgtcgtggtgcactagctgagaaagtaaactacaca
acaacgctaaatgcagcatttgctagttgtttagcgcatgaagcggatgaccgtaaaacg
gttaactctgttcaagagctacacgctaaagtggcagctaaatacgcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (39)   

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