KEGG   Aliivibrio fischeri MJ11: VFMJ11_A0190
Entry
VFMJ11_A0190      CDS       T00754                                 
Name
(GenBank) dead/deah box heliCase domain/helicase conserved domain/dbpa rna binding domain protein
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
vfm  Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:vfm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vfm03009]
    VFMJ11_A0190
Enzymes [BR:vfm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     VFMJ11_A0190
Ribosome biogenesis [BR:vfm03009]
 Prokaryotic type
  rRNA helicases
   VFMJ11_A0190
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_19 Helicase_C_2 AAA_30
Other DBs
NCBI-ProteinID: ACH64102
UniProt: B5ESS9
Position
II:complement(215840..217228)
AA seq 462 aa
MSQTSFSSLDLHPSLLQNLETLGYNEMTPIQAQSLPFMLKGKDVIAQGKTGSGKTAAFGL
GLLANLNVKRFRVQSLVLCPTRELADQVAKEIRKLARAIHNIKVLTLCGGVPFGPQIGSL
EHGAHIIVGTPGRVEEHLRKGYLNLDNLNTFVLDEADRMLEMGFQDAIDAVLDHAPVKRQ
NLLFSATFPPQIKSIADRIMNDPIMTKAEETVENTSINQHFFKVGDFEDRLEALQILLLK
HQPESTVIFCNTKRVTQEVADELRHYDFSVTALHGDLEQRDRDKALVRFANKSTSILVAT
DVAARGLDIESLDAVVNFELSRDPEVHVHRIGRTGRAGNKGIALSLFNEKEMHNIAQIEE
YMNIDIRDEALPSADYLKEPAYYAEMVTLWIDGGKKNKLRPGDILGALTGKDGIEGKMVG
KINVFDFHAYVAVHNTVAKAALKKLESGKMKGRSFRVSRMRG
NT seq 1389 nt   +upstreamnt  +downstreamnt
ttgagtcaaacatctttctcatcattagatctgcatccgtcacttttacaaaacctagaa
acattaggttataacgaaatgacaccaatccaagcacaaagcttacctttcatgctaaaa
gggaaagatgttattgcccaagggaaaacgggctcaggtaaaacggcggcatttggttta
ggtttattagctaacttaaatgtaaaacgctttcgtgttcaatctttggttttatgccca
acacgtgaactggctgatcaagtagcaaaagaaattcgtaaacttgctcgtgcaattcat
aacattaaagtactaactttatgcggcggtgttccttttggcccacaaataggttcatta
gaacacggtgctcacattatcgttggtactccaggtcgtgttgaagagcaccttcgtaaa
ggttacttaaacttagataacctaaatacatttgttcttgatgaagcagaccgtatgtta
gaaatgggcttccaagatgcaattgatgcggtattagatcacgcaccagttaaacgtcaa
aatcttctgtttagtgcgactttcccaccgcaaatcaagtccattgcagatcgcatcatg
aacgatccaatcatgactaaagcagaagaaacagtggaaaacacatcaattaatcaacac
ttctttaaagtgggtgattttgaagatcgtctagaagcactgcaaatcctattgcttaag
caccaacctgaatcaacagttatcttctgtaatacaaaacgtgtaacccaagaagtggca
gatgaacttcgtcattacgatttcagcgtaactgcacttcacggtgatttagaacaacgt
gatcgtgataaagcgttagtacgttttgccaataagagtacgtcgattcttgttgcaacc
gacgttgctgcacgtggtttagatatcgaatcacttgatgctgtggttaactttgaatta
tctcgtgatcctgaagtacacgttcaccgtattggtcgtacaggtcgcgcaggaaataaa
ggtattgctctaagccttttcaatgaaaaagaaatgcacaacattgctcaaatcgaagaa
tacatgaacattgatattcgtgatgaagcgttaccaagtgctgattacctaaaagagcct
gcttactacgctgaaatggttactttatggattgatggtggtaagaaaaacaaactacgt
ccgggtgacattttaggtgcgcttactggtaaagacggtatcgaaggtaaaatggttggt
aagatcaacgtgtttgatttccatgcttatgttgctgttcataataccgttgcaaaagca
gcgcttaagaaactagaaagtggcaaaatgaaaggccgtagcttccgcgtaagccgtatg
cgtggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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