KEGG   Viruses: 1481843
Entry
1481843           CDS       T40000                                 
Symbol
SCPMVgp3
Name
(RefSeq) Southern cowpea mosaic virus; polyprotein P2ab
Virus
196398  Southern cowpea mosaic virus
SSDB
Motif
Pfam: RdRP_4 RdRP_1 Peptidase_S39 Trypsin_2
Other DBs
NCBI-GeneID: 1481843
NCBI-ProteinID: NP_042302
RS: NC_001625
UniProt: Q83470 P21405
Position
NC_001625:join(570..1802,1802..3439)
AA seq 956 aa
MYRPSCLSYVLLVANMWSFAVCANAFIYGSYDPSHNIPIVALMTLCATGLWLSTSVVSFG
IRYVRVRVSPEKTQNRTIYVSSGLPHFDPVYGVVKKCEPMGGGPAIELQVNPSWIHLLPT
SPAINKVEVGQESAILGSTYSVVETGGEPKSLVAVKSGDSTLGFGARVYHEGMDVLMVPH
HVWYNDKPHTALAKNGRSVDTEDWEVEAACADPRIDFVLVKVPTAVWAKLAVRSTKVLAP
VHGTAVQTFGGQDSKQLFSGLGKAKALDNAWEFTHTAPTAKGWSGTPLYTRDGIVGMHTG
YVDIGTSNRAINMHFIMSCLVSKMETLPPELGYREISLEDVGLRSFEFLEVEIENRGKVK
LGKREFAWVPKGKAWADMLDDDDLPLPPKMVNGNLVWADAQESFDGALPLNLLAGGRTQC
LAAQIELGDYKFSCGPTHETGGMPFRNCGSSTCKFREVSRKPVADAVTAATKVFPELSEL
GWPERGSGAEIGSLLLQAGKFVPTKAPSNLEQAYNNLLSRYPRSKPLACFRQGTWSFDAI
FEQVVSKATSAEINQKASPGVPLSRLATTNKDLMAQHMQFVAACVTGRVPLLASFEDIHA
LSPTEMVEMGLCDPVRLFVKQEPHPSRKLKEGRYRLISSVSIVDQLVERMLFGAQNELEI
AEWQSIPSKPGMGLSVIHQADAIFRDLRVKHTVCPAAEADISGFDWSVQDWELWADVEMR
IVLGSFPPMMARAARNRFSCFMNSVLQLSNGQLLQQELPGIMKSGSYCTSSTNSRIRCLM
AELIGSPWCIAMGDDSVEGFVEGAREKYAGLGHLCKDYKPCATTPTGQLYAVEFCSHVIK
RNKAFLTSWPKTLYRFLSTPRETLEDLERELASSPMWHKIQSYVRSIPSPDKTARDKSIC
NGYPLDQEAISTSYSEYSSKSASAEATREAACCAGAQAYPSWGIHGPYCSGDHGEA
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgtatcgtccgagttgcctttcatatgtcctcctagttgcgaacatgtggagcttcgcc
gtgtgcgcaaatgcgttcatctacgggtcatacgaccccagccacaatattccaattgtg
gccttgatgaccctgtgcgctacagggctctggttgagcacgtccgtggtgtccttcggg
attcgctacgtgagggtgcgagtttcgcctgaaaagacgcagaaccgcaccatatacgtc
tcctctgggctacctcattttgaccccgtttatggggttgttaagaagtgtgagcctatg
gggggcggcccagccattgagctacaggttaacccatcttggatccatctcctgcctact
tctcctgcgataaataaggttgaagtaggacaggaatcggccattttgggcagtacctac
tctgtagtggaaaccggtggagagcctaagagtttggttgccgttaagagtggagacagc
acccttgggtttggagcccgtgtctaccatgagggcatggatgtcctcatggtacctcac
catgtgtggtacaatgacaaaccccatacagctttagccaagaacggtcgttcggtagac
actgaagactgggaggttgaggctgcatgtgctgatccacgtattgacttcgtgctagtt
aaagtccccactgcggtgtgggctaagctggctgttaggtctactaaggtgttggcacca
gtgcatggaactgcagtccaaacatttggagggcaggattccaagcaattattctcgggc
ttgggaaaggcgaaagccttagacaatgcctgggaatttactcacacagctccaaccgct
aaaggatggagcgggactccgctctatactagagatggaattgtgggtatgcacactggt
tacgtcgacatcggcacatcaaaccgggccatcaacatgcacttcattatgtcctgtttg
gtgtccaaaatggagactctccccccagagcttggctaccgcgagatatccctagaggat
gtcggactccgtagttttgagtttctagaggtggagattgagaataggggcaaagtgaag
ttgggtaagcgtgaattcgcctgggtgcctaaagggaaagcctgggcggacatgcttgac
gatgatgatttaccccttcctccaaagatggtgaatgggaatctggtttgggctgatgct
caagagagctttgatggagcccttcctttaaacctgcttgcgggcggccggacgcaatgt
cttgccgcccaaattgaacttggtgactataaattctcctgtggacccacccacgaaaca
ggtggcatgcccttcagaaattgtggatcatcgacttgcaagtttagagaagtgtctcga
aaacctgttgcagacgctgtcacagccgcaacaaaagttttcccagaactctctgagctc
gggtggcctgaaaggggatcaggagctgaaattggctccctgctactccaagcaggaaag
tttgttcccaccaaagccccgagcaacctcgagcaagcctataacaacctcctctccagg
taccccaggtcgaagccccttgcctgtttcaggcaaggaacttggtccttcgacgcaatc
ttcgagcaagttgtctcgaaagcaacgtcggcggagatcaaccaaaaggccagtccaggg
gtccccctctcccgcctcgccaccaccaacaaggacttaatggcgcaacacatgcagttc
gtagctgcttgtgtaactgggagagtgccactcctagcctccttcgaggatatacacgct
ctatctcccactgagatggtagagatgggcttgtgtgacccggtgcggctttttgtcaaa
caagagccgcacccgtctcgtaagttgaaggaagggaggtatcggcttatctcctcggtc
tcaatcgtcgaccaattggtcgaaagaatgctctttggagctcagaacgagttagagatt
gctgagtggcaatctatcccttcaaaacccggtatggggctttccgtcatccaccaagct
gacgcgatattccgtgacttgcgagtcaaacataccgtgtgtcctgcagctgaagcagac
atatctggttttgattggtccgttcaggactgggaattgtgggctgatgttgaaatgaga
atcgttttgggctctttcccacccatgatggctagagctgctaggaacaggttttcatgc
ttcatgaactcagtcctgcaactctcaaacggacagttactccagcaagagctgccgggg
atcatgaaatctggatcttattgcacctcctccactaattcgcggatacgttgccttatg
gctgagcttattggttccccatggtgcatcgccatgggtgacgactccgtggagggtttt
gtggagggggctagggagaagtatgcggggctggggcacttgtgcaaggattacaagcct
tgtgcaaccacccccacaggccagttgtatgccgtggagttctgttcccacgtgattaaa
cgcaataaggcgtttcttacatcatggcccaaaactctgtataggttccttagcacgccg
agggagacgctggaagatctcgagagagagcttgcatcctcccccatgtggcataagatt
cagagttatgtccggtctattccatcaccggacaaaaccgcgcgagataagagcatttgt
aatggctacccgcttgaccaagaagcaattagcacaagctattcagaatactcttccaaa
tccgcctcggcggaagcgacgcgcgaagcggcgtgctgcgcaggtgcccaagcctaccca
agctggggtatccatggcccctattgctcaggggaccatggtgaagcttag

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Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (2)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
Taxonomy (1)   
   TAX (1)   
All databases (28)   

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