KEGG T40000: 22220341

Viruses: 22220341

Entry

22220341          CDS       T40000

Symbol

P1192R, ASFVgp107

Name

(RefSeq) African swine fever virus; topoisomerase II

K26426

Asfivirus DNA topoisomerase II [EC:5.6.2.2]

Virus

10497 African swine fever virus

SSDB

Motif

Pfam:

DNA_topoisoIV TOPRIM_C HATPase_c DNA_gyraseB

Other DBs

NCBI-GeneID:

22220341

NCBI-ProteinID:

NP_042805

UniProt:

Q00942 A0A3G1EV72 A0A0A1E3Q0 A0A1B0QWZ8 A0A0N7CVI8 A0A0A1E0R3

Structure

Position

NC_001659:130722..134300

AA seq 1192 aa
MEAFEISDFKEHAKKKSMWAGALNKVTISGLMGVFTEDEDLMALPIHRDHCPALLKIFDE
LIVNATDHERACHSKTKKVTYIKISFDKGVFSCENDGPGIPIAKHEQASLIAKRDVYVPE
VASCFFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILTTADGAQKYVQQINQRLDII
EPPTITPSREMFTRIELMPVYQELGYAEPLSETEQADLSAWIYLRACQCAAYVGKGTTIY
YNDKPCRTGSVMALAKMYTLLSAPNSTIHTATIKADAKPYSLHPLQVAAVVSPKFKKFEH
VSIINGVNCVKGEHVTFLKKTINEMVIKKFQQTIKDKNRKTTLRDSCSNIFVVIVGSIPG
IEWTGQRKDELSIAENVFKTHYSIPSSFLTSMTRSIVDILLQSISKKDNHKQVDVDKYTR
ARNAGGKRAQDCMLLAAEGDSALSLLRTGLTLGKSNPSGPSFDFCGMISLGGVIMNACKK
VTNITTDSGETIMVRNEQLTNNKVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVDQ
DLDGCGKILGLLLAYFHLFWPQLIIHGFVKRLLTPLIRVYEKGKTMPVEFYYEQEFDAWA
KKQTSLVNHTVKYYKGLAAHDTHEVKSMFKHFDNMVYTFTLDDSAKELFHIYFGGESELR
KRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQIPNFLDGMTRARRK
ILAGGVKCFASNNRERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQYYPGSSHLYPVFI
GIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYVFEDGQRAEPEYYVPV
LPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKDNPKHELLHYAIKHKITILPLR
PSNYNFKGHLKRFGQYYYSYGTYDISEQRNIITITELPLRVPTVAYIESIKKSSNRMTFI
EEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQDSIENFLRLRNCLHSHLNFVKPKG
GIIEFNSYYEILYAWLPYRRELYQKRLMREHAVLKLRIIMETAIVRYINESAELNLSHYE
DEKEASRILSEHGFPPLNHTLIISPEFASIEELNQKALQGCYTYILSLQARELLIAAKTR
RVEKIKKMQARLDKVEQLLQESPFPGASVWLEEIDAVEKAIIKGRNTQWKFH

NT seq 3579 nt +upstreamnt +downstreamnt
atggaagcgtttgaaatcagcgatttcaaagagcatgcgaagaaaaaaagcatgtgggct
ggcgccctcaacaaagtcactatttcgggtcttatgggggtctttaccgaagatgaggac
cttatggcgttacccattcacagagaccactgtcccgctttgttaaaaatttttgacgag
ctcatcgtaaatgccacggatcatgaaagagcttgccatagcaaaacaaaaaaggtaacc
tacatcaaaatttcgtttgataaaggcgtgttttcttgcgaaaacgatggcccgggaatc
cccattgcaaagcatgagcaggccagtcttatcgccaagcgcgatgtgtatgttcccgag
gtggcttcatgcttctttctagccggaacgaacatcaataaggccaaggactgtatcaag
gggggaaccaacggcgtcgggctgaagctcgccatggtgcattcgcagtgggccattctt
accaccgccgacggcgcgcaaaagtatgttcaacaaatcaaccagcgcctagatatcatt
gagcctcctaccattacaccctccagggaaatgtttacacgtatcgagctcatgcccgta
taccaggaactagggtacgcggagcctctgtctgaaacggagcaagcagatctttccgcc
tggatttatcttcgcgcctgccaatgcgcggcctacgtgggaaaaggcaccaccatttat
tacaatgataagccttgccgcacgggctctgtgatggcgctggccaaaatgtacaccctg
ttgagcgcgcctaatagcacgatacatacggcgaccattaaggccgacgcaaaaccctat
agcctgcaccctctgcaggttgcggcggtcgtgtcccccaagtttaaaaaatttgaacac
gtgtccattatcaacggggtaaattgtgtaaaaggagaacatgttacctttttgaaaaag
accattaatgaaatggtcattaaaaaatttcaacagacgattaaagataaaaaccgcaaa
acaacattacgtgacagctgttcaaacatctttgtcgttatagtgggttccattccaggc
atagaatggaccggccagcggaaggatgaacttagcatcgcagaaaatgtttttaaaacg
cattactccatcccttctagttttttaacaagcatgacaaggtctatcgtggatattctt
ctgcaatccatttctaaaaaagataaccataaacaggtcgacgtagacaaatatacgcgt
gcccgcaatgcgggagggaaaagggcgcaggactgcatgctactcgcggcggaaggggat
agcgcactttccctgttgcgcacgggactgaccctgggaaagtccaacccaagcgggccc
tcctttgacttctgcggcatgatctccctgggaggggtcatcatgaatgcctgcaaaaag
gtgacaaacattacaacggactctggagaaaccatcatggtgcgcaacgaacagcttacc
aataataaagtgttgcagggaattgtgcaggtattgggtctagacttcaactgccattac
aaaacgcaggaagagcgagcaaagctgagatacggctgcattgttgcgtgcgttgatcaa
gatctggatgggtgtggaaaaatccttggactgctgctggcctactttcacctgttttgg
cctcagcttattatccatggtttcgtaaaacgactgcttaccccgctgatacgtgtgtac
gaaaagggcaagactatgcccgtagaattttactatgaacaggagtttgatgcctgggca
aaaaagcagaccagcttagtcaatcatactgtaaaatattacaagggattggcggcgcat
gacacccatgaagtaaaaagcatgttcaaacattttgacaacatggtgtacacgtttacc
ctggatgactcggcaaaggagttgtttcatatttattttggcggggagtcggagttgcga
aaaagagagctttgcaccggcgtggtgccgctcactgaaacccagacgcagtccattcat
agtgtccgacgaattccttgcagcctgcatctgcaggtagataccaaggcttacaagctg
gatgccatcgagcggcagattcccaacttcttagacggaatgacgcgggcgcggcgcaaa
attttagccgggggggtgaaatgcttcgcttccaacaaccgtgaacgaaaggtttttcag
ttcgggggctacgttgcggatcacatgttttatcaccatggcgacatgtcgttaaacaca
agtattataaaagccgcccagtattacccgggctcctcccacctctatccagtattcata
ggcataggaagcttcggctccaggcacctgggaggaaaggatgcaggatccccaagatac
atcagtgtgcagcttgcgtctgaatttattaaaacaatgttccccgcggaggactcatgg
cttctcccctacgtctttgaggacggccagcgggcggaaccagagtactacgtgcctgta
ttgccgcttgctattatggagtacggcgccaacccatcggagggctggaagtacaccact
tgggcccggcaactggaagacattttggccttggtgagggcctacgtcgacaaagacaac
ccaaaacacgagctactgcactatgcaataaaacataagattactatactcccgctgcgg
ccctccaattacaatttcaagggccatttgaagcggtttggccaatactactacagctac
ggcacgtacgacatctcagagcagcgaaatataattactattacggagcttcctctgcgt
gttcctacggttgcatatatcgaaagtataaaaaaatcgagtaaccgcatgacatttatt
gaagaaatcatcgactacagtagttcagaaaccattgaaattctggtgaaactaaagcca
aatagtctcaaccgtatcgtggaagaatttaaggagactgaagagcaagattccatagaa
aattttctgcgcctgcgcaattgtttacattcgcatctaaactttgtaaaacctaaaggt
ggtattatcgagtttaactcatattatgaaattttatatgcgtggctaccttacaggcgt
gagctttaccaaaagcgtcttatgcgtgagcacgcggtgcttaagctgcgcattatcatg
gaaactgctattgtacgctacatcaatgagtctgcagagctaaatctttcccattatgag
gatgaaaaggaggcaagccgcattctaagcgagcatggatttcccccgctgaaccacacg
ctgatcatttcccctgagtttgcctctatagaggaactcaatcaaaaagcgctgcagggc
tgttatacctatatactatctttgcaggctcgagaattgcttatcgcagccaaaactcgt
cgggtggaaaaaataaaaaaaatgcaagctcgtcttgataaggttgagcagcttttgcag
gagtctccctttcccggcgccagcgtatggctggaggaaattgatgcggtggaaaaggct
attataaaaggaagaaatactcagtggaaatttcattaa

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (8)   
   UniProt (6)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (15)   
   PDB (15)   
Protein domain (4)   
   Pfam (4)   
Taxonomy (1)   
   TAX (1)   
All databases (58)   

Download RDF

DBGET integrated database retrieval system